KEGG   Mus musculus (house mouse): 12753
Entry
12753             CDS       T01002                                 
Symbol
Clock, 5330400M04Rik, KAT13D
Name
(RefSeq) clock circadian regulator
  KO
K02223  circadian locomoter output cycles kaput protein [EC:2.3.1.48]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04710  Circadian rhythm
mmu04728  Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09156 Nervous system
   04728 Dopaminergic synapse
    12753 (Clock)
  09159 Environmental adaptation
   04710 Circadian rhythm
    12753 (Clock)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    12753 (Clock)
   03036 Chromosome and associated proteins [BR:mmu03036]
    12753 (Clock)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     12753 (Clock)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    12753 (Clock)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    12753 (Clock)
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS HLH PAS_9 DUF6080
Other DBs
NCBI-GeneID: 12753
NCBI-ProteinID: NP_001276755
MGI: 99698
Ensembl: ENSMUSG00000029238
UniProt: O08785 Q8C9W6
Structure
Position
5:complement(76357715..76452675)
AA seq 855 aa
MVFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSM
LPGNARKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLSNEEFTQLMLEALDG
FFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESDSL
TPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVRFIGNFKSLTSVSTSTHNGFEGTIQRT
HRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYL
PFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYH
QWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLKEA
LERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMTQRRSSF
SSQSINSQSVGPSLTQPAMSQAANLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIEAN
IHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSNIQQLTPVNMQGQV
VPANQVQSGHISTGQHMIQQQTLQSTSTQQSQQSVMSGHSQQTSLPSQTPSTLTAPLYNT
MVISQPAAGSMVQIPSSMPQNSTQSATVTTFTQDRQIRFSQGQQLVTKLVTAPVACGAVM
VPSTMLMGQVVTAYPTFATQQQQAQTLSVTQQQQQQQQQPPQQQQQQQQSSQEQQLPSVQ
QPAQAQLGQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPPSHHQQHQPQQQQQLPR
HRTDSLTDPSKVQPQ
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggtgtttaccgtaagctgtagtaaaatgagctcaattgttgacagagatgacagtagt
atttttgatggattggtggaagaagatgacaaggacaaagcaaaaagagtatctagaaac
aaatcagaaaagaaacgtagagatcagttcaatgtcctcattaaggagctggggtctatg
cttcctggtaacgcgagaaagatggacaagtctactgttctacagaagagcattgatttt
ttgcgcaaacataaagagaccactgcacagtcagatgctagtgagattcgacaggactgg
aaacccacattccttagtaatgaagagtttacacagttaatgttagaggctcttgatggt
ttttttttagcgatcatgacagatggaagtataatatatgtatctgagagtgtaacttcg
ttacttgaacatttaccatctgatcttgtggatcaaagtatatttaattttatcccagag
ggagaacattcagaggtttataagatactctctactcatctgctggaaagtgactcatta
acccctgagtacttaaaatcaaaaaatcagttagaattctgttgtcacatgcttcgagga
acaatagacccaaaggagccatccacctatgaatatgtgagatttataggaaattttaaa
tctttaaccagtgtatcaacttcaacacacaatggttttgaaggaactatacaacgcaca
cataggccttcttatgaagatagagtttgttttgtagctactgtcagattagctacacct
cagttcatcaaggaaatgtgtactgttgaagaaccaaatgaagagtttacatctagacac
agtttagaatggaagtttctatttttagatcacagggcaccaccaataataggctatttg
ccatttgaagtcttgggaacatcaggctatgattactatcatgtggatgacctagaaaat
ctggcaaaatgtcacgagcacttaatgcaatatggaaaaggcaaatcgtgttactataga
ttcctgaccaaaggccagcagtggatatggcttcagactcattattatattacttaccat
cagtggaattcaaggccagagttcattgtttgtactcacactgtagtaagttatgcagaa
gttagggctgaaagacggcgagaacttggcattgaagagtctcttcctgagacagctgct
gacaaaagccaagattctgggtctgacaatcgtatcaacacagtgagtctcaaggaagca
ctggaaaggtttgatcacagcccaactccttctgcctcctctagaagctcacgaaagtca
tctcacaccgcagtctcagacccttcctccacaccgacaaagatccctactgatactagc
actcctcccagacagcatttgccagctcatgaaaagatgacacagcggaggtcgtccttc
agcagtcagtccataaactcccagtcagttggtccatcattaacacagccagcgatgtct
caagctgcaaatttaccaattccacaaggcatgtcacagtttcagttttcagctcagtta
ggagccatgcagcatctaaaagaccagctagagcagcggacacggatgatagaggcaaat
attcatcggcagcaagaagaactaaggaaaattcaagagcaacttcagatggtccatggt
caagggctacagatgtttttgcagcaatcaaaccctggattgaattttggttctgttcaa
ctttcctctggaaattctaatatccagcaactcacacctgtaaatatgcaaggccaggtt
gtccctgctaaccaggttcagagtggacatatcagcacaggccagcacatgatacagcaa
cagactttacaaagtacatcaactcagcagagtcaacagagtgtaatgagtggacacagt
cagcagacgtctcttccaagtcagacaccgagcactctcacagccccactgtacaatacg
atggtgatttcccagcctgcagctgggagcatggtccagattccatccagtatgccacag
aacagtacccagagtgctacagtcactacgttcactcaggacagacagataagattttct
caaggtcagcaacttgtgaccaaattagtgactgctcctgtagcttgtggggccgtcatg
gtaccaagtaccatgcttatgggtcaggtggtgactgcctatcctaccttcgccacacaa
cagcagcaggcacagacattatcggtaacacaacagcagcagcagcagcagcagcagcca
ccacagcaacagcaacaacaacagcagagttcccaggaacagcagcttccttcagttcag
cagccagctcaggcccagctgggccagccaccacagcagttcttacagacatctaggttg
ctccacgggaatccttcgacacagctcatcctctctgctgcctttccactacaacagagc
actttccctccttcgcaccaccagcaacaccagcctcagcagcaacagcagcttcctcgg
cacaggactgacagcctgactgacccttccaaggtccagccacagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (21)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (18)   
DNA sequence (53)   
   RefSeq(nuc) (25)   
   GenBank (14)   
   EMBL (14)   
3D Structure (6)   
   PDB (6)   
Protein domain (6)   
   Pfam (6)   
All databases (110)   

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