KEGG   Mus musculus (house mouse): 12788
Entry
12788             CDS       T01002                                 
Symbol
Cnga1, Cncg
Name
(RefSeq) cyclic nucleotide gated channel alpha 1
  KO
K04948  cyclic nucleotide gated channel alpha 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04022  cGMP-PKG signaling pathway
mmu04024  cAMP signaling pathway
mmu04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    12788 (Cnga1)
   04022 cGMP-PKG signaling pathway
    12788 (Cnga1)
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    12788 (Cnga1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    12788 (Cnga1)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   12788 (Cnga1)
SSDB
Motif
Pfam: Ion_trans CLZ cNMP_binding DUF2207_C CDC45 Tim54 Ion_trans_2 Sec62 SLC52_ribofla_tr Ndc1_Nup Peptidase_U57 RNA_polI_A34 NPR3 DDHD DUF2370 RNA_pol_Rpc4 FancD2 Zip DUF2828 CLN3
Other DBs
NCBI-GeneID: 12788
NCBI-ProteinID: NP_031749
MGI: 88436
Ensembl: ENSMUSG00000067220
UniProt: P29974
Position
5:complement(72761039..72800095)
AA seq 684 aa
MKTNIINTWHSFVNIPNVIVPAIEKEIRRMENGACSSFSDDDNGSLSEESENEDSFFRSN
SYKRRGPSQREQHLPGTMALFNVNNSSNKDQEPKEKKKKKKEKKSKADDKNENKKDPEKK
KKKEKEKEKKKKEEKTKEKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMIIARAC
FDELQSDYLEYWLIFDYVSDVVYLADMFVRTRTGYLEQGLLVKDRMKLIEKYKANLQFKL
DVLSVIPTDLLYIKFGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIV
IIIHWNACVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPP
PVLDSEYIFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSK
DMEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLL
VELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEIS
ILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGL
LDINIANMGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP
LIETEFSALEEPGGESELTESLQD
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgaagacaaatattatcaatacgtggcattccttcgtaaatattcccaatgtgatcgta
ccagccattgaaaaggaaatccggcggatggaaaatggagcgtgcagctccttttctgac
gatgacaatggctctctgtctgaagaatcagagaatgaggactctttctttagaagcaac
tcgtacaaaaggcgaggaccatcacagagggagcagcacttgccaggtactatggctctt
ttcaatgtcaacaacagcagcaacaaagaccaagagccaaaggagaaaaagaaaaaaaag
aaggaaaagaagagcaaggccgatgataaaaatgaaaataaaaaggacccagagaagaaa
aagaagaaggaaaaggaaaaagagaagaaaaagaaggaggagaaaaccaaagagaagaaa
gaagaggagaagaaagaagtcgtggttattgatccttcaggaaacacatactacaactgg
ctgttttgtatcactttgcctgtgatgtacaactggacgatgattattgcaagagcatgt
tttgatgaactccagtctgattacctagaatactggctcatttttgattacgtatcagat
gtagtctatcttgccgatatgtttgtacgaacaaggacaggttacctggaacaagggctg
ctagtgaaagacagaatgaaactcatagagaaatacaaagcaaacctgcagtttaaactt
gatgttctgtcagtgataccgaccgatctgctgtacatcaagtttgggtggaactatcca
gaaatcaggttaaaccggctgttaaggatctctcgaatgtttgagttcttccagaggacg
gaaacaaggaccaactacccaaacatctttaggatttcgaaccttgtgatgtacatcgtc
atcatcatccactggaacgcttgtgtgtattattccatctcaaaagctattggatttggg
aatgacacatgggtctaccctgatgttaatgatcctgaattcggccgtttagctagaaaa
tatgtctacagcctttattggtctactttgactttgacaaccattggtgaaactccacct
cccgtgctggattctgagtacatctttgtggtggtagacttcttaattggagttttaatt
ttcgccaccattgtcggtaacataggttccatgatttccaatatgaatgcagcccgggca
gaatttcaatcaagagttgatgctatcaaacagtacatgaattttcgaaatgtaagcaaa
gatatggaaaagagggttattaaatggtttgactacctgtggaccaacaaaaaaacagtg
gatgagagagaagtcctgagatacctccctgacaaactaagggcagaaattgccatcaac
gttcatctagacacgttaaaaaaggttcgcatctttgctgactgtgaagctggtctgttg
gtggagttggtgttgaaactacaaccccaggtgtatagtcccggagattacatatgcaag
aaaggggacatcgggcgggagatgtacatcatcaaggaaggcaaacttgctgtggtggca
gatgacggaattacacagtttgtggtgttgagtgacggcagttactttggtgagatcagc
attcttaatatcaaaggcagcaaggctggcaaccgaagaacagccaacattaagagcatc
ggctactcggacctgttctgcctctccaaagatgacctcatggaagctcttacagagtac
ccagatgccaaaactatgctggaagagaaagggaggcagatcttaatgaaagatggtctg
ctggatataaacattgcaaatatgggcagtgaccctaaagacctggaagagaaggtcact
cgaatggaggggtcagtggacctcctgcaaacgcgatttgcccgtatcttggctgaatat
gagtcgatgcagcagaaactcaagcaaagattaaccaaggtcgagaaatttctgaaaccg
cttattgaaacagaattttcagctctggaggaacccggaggggaaagtgagctcacggag
tctctacaggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (26)   
   RefSeq(nuc) (2)   
   GenBank (12)   
   EMBL (12)   
Protein domain (20)   
   Pfam (20)   
All databases (69)   

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