KEGG   Mus musculus (house mouse): 12815
Entry
12815             CDS       T01002                                 
Symbol
Col11a2
Name
(RefSeq) collagen, type XI, alpha 2
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04820  Cytoskeleton in muscle cells
mmu04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    12815 (Col11a2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    12815 (Col11a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    12815 (Col11a2)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   12815 (Col11a2)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 12815
NCBI-ProteinID: NP_001304651
MGI: 88447
Ensembl: ENSMUSG00000024330
UniProt: Q64739
Position
17:34257462..34285659
AA seq 1715 aa
MERCSRCHRLLLFLPLVLGLSAAPGWAGAPSVDVLRALRFPSLPDGVRRSKGVCPGDVAY
RVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYSAQGVQQLGLELGRPV
RFLYEDQRGRPQASAQPIFRGLSLADGKWHHVAVAVKGQSVTLIVDCKKRVTRPLPRSVH
PVLDTHGVVIFGAHILDDEVFEGDVQELLVVPGVQAAYQSCGQKDLECEREQRDGPQTQK
PHRAQRSPKKEPARLHKPQSQEPQKQPTESLYYDYEPPYYDVMTTGTAPDYQEQTDLQVS
PTADSFQAEEYGEGGTDSPAGFYDYTYGYGDDYREETELGPALSAETAHSGAVAHGPRGL
KGEKGEPAVLEPGMFVEGPPGPEGPAGLAGPPGIQGNPGPVGDPGERGPPGRAGLPGSDG
PPGPPGTSLMLPFRFGSSGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPL
GQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGMKGDRGFD
GLPGLPGEKGQRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIP
GPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGLP
GMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGED
GFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPTGLMGEKGKLGVPGLP
GYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAK
GTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPAGKDGLPGHPGQRGEVGFQGKTGPP
GPPGVVGPQGTAGESGPMGERGHSGPPGPPGEQGLPGTSGKEGTKGDPGPPGAPGKDGPA
GLRGFPGERGLPGTAGGPGLKGNEGPAGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPP
GAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNK
GEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLP
GPSGEKGETGDGGPMGPPGPPGPRGPAGPNGADGPQGSPGGVGNLGPPGEKGEPGESGSP
GVQGEPGVKGPRGERGEKGESGQAGEAGPPGPKGPTGDNGPKGNPGPVGFPGDPGPPGEA
GPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDP
GAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR
GDAGAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGETGIPGASGPIGPGGPP
GLPGPSGPKGAKGATGPAGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSKL
IQDEEAVPTGGAPGSPAGLEEIFGSLDSLREEIEQMRRPAGTQDSPARTCQDLKLCHPEL
PDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDVTQFSYVDSEGSPVGVVQLTFLR
LLSVSAHQDVSYPCSGVSQDGPLKLRGANEDELSPETSPYVKEFRDGCQTQQGRTVLEVR
TPVLEQLPVLDASFADLGAPTRRGGVLLGPVCFMG
NT seq 5148 nt   +upstreamnt  +downstreamnt
atggagcggtgcagccgctgccaccgcctccttctgttcctacctctggtgctgggtctg
agcgctgccccgggatgggcaggtgctccctctgtggatgtgcttcgtgccctgaggttc
ccctcccttcccgatggtgttcggagatcaaaaggggtctgtccgggtgatgtggcttac
cgtgtggcacggcctgcccagctcagcgcacccacgcgccagctcttcccaggaggcttt
cccaaagacttctctctgctgacggttgtccggacccgccctggcctccaggctcccctc
ttgactctatacagcgcccagggagtccagcagctgggcttggagctcggccgccctgtc
cgctttctctatgaggaccagaggggacggccacaagcctccgctcagcccatcttccga
ggcctcagcctagcagatggcaaatggcaccacgtggctgtggctgtgaagggtcagtct
gtcactctcattgtggactgtaagaagcgagttacccggccccttcccagaagtgtgcat
ccggtgttggacacccacggggtggtgatctttggtgcccacatcctcgacgatgaagtc
tttgaaggcgatgttcaggagctcctcgttgtcccaggcgtccaagctgcctatcagtct
tgtgggcagaaggatctggaatgtgagagagaacagagggacggccctcagactcagaag
cctcacagagcccagagatctccaaagaaggaaccagcaagacttcataagccacagagc
caggagccccagaagcagcccactgagtctctctactatgactacgaacccccctattac
gatgtgatgactacggggacagcccctgattatcaggagcagacagatcttcaggtctcc
ccaacagctgacagtttccaggcagaggaatatggggagggaggcacagactccccagca
gggttctacgattacacctatggctatggggatgattatcgtgaggagaccgagcttggc
cctgccctctctgcggagacagctcactcaggagccgttgcccacggaccccgggggcta
aagggagagaagggagagcctgcagtgctggagcctggtatgtttgtagagggaccccca
ggcccagaaggcccagcgggattagctggaccccctggcatccaggggaacccaggcccg
gttggagaccccggtgagaggggcccccctggccgagcagggctccccggatcagatgga
ccccctggtcctcccggcacatctctgatgcttccattccggtttggcagtagtgggggt
gacaagggccccgtggtggcagcccaggaggcccaggcccaggcgattctgcagcaggca
cggctggcactccgtgggccccctggccccatgggttacacgggccgccctggaccattg
ggtcagcctgggagccctggcttgaagggagaatctggagatctgggcccacagggcccc
agaggacctcagggcctcacaggtcctcctggcaaggctggacgaaggggccgagcaggt
gctgatggagcccgtgggatgccgggagaacctggcatgaagggtgaccgaggtttcgac
ggacttccagggctacctggcgagaagggacaaaggggtgatacaggtgctcagggcctt
cctgggcctcctggtgaggacggagagaggggtgatgatggagagattgggccacggggg
ctgcctggagagtcgggacctagaggactccttggccctaaaggcccgcctggtattcct
gggccgccgggagtccgaggcatggacggtccccacggccccaaagggagcttgggacct
caaggagagccaggacctcctggacaacagggtactcctggggcccagggcctccccgga
cctcagggagccatcggtcctcatggagagaagggtgctcgtgggaaaccaggcctccct
ggcatgcctggatcagatggactcccgggtcacccagggaaggaaggtccccctggaacc
aaagggaaccagggcccgtccggaccacagggtcctctaggatacccaggccctcgaggc
gtcaagggtgtggatggaattcggggcctgaagggccacaagggtgaaaagggcgaggac
ggctttcctgggttcaaaggtgacataggagtgaaaggagacaggggcgaggttggagtc
cctggttccaggggcgaagacggccctgaagggccaaaagggcgcactggacctacagga
gaccctggacccactgggctcatgggcgagaagggcaagctaggtgttcctggtctgcct
ggctatcctggacgccagggccccaagggatctctgggtttccctggttttcctggagcc
agtggagagaagggagctcggggcctgtctgggaaatcaggacctcggggagaacggggc
cccacgggtccaaggggtcagcggggacctcgaggtgccactgggaaatctggagctaag
ggaacatcaggtggtgacggtccccacgggccacccggagagaggggtcttcctggacct
caaggccccaatggatttcctggccccaaaggccctccgggccctgcagggaaggatggg
ctgccgggacaccccggccagagaggagaagtgggattccaaggaaagaccggcccacca
ggcccgcccggagtggtgggacctcagggaacagctggagaaagtggtcccatgggagag
agaggtcactctggccccccaggacctcctggagagcaaggattgcctggaacatctggg
aaagaagggaccaagggtgaccctggtcctcctggggccccagggaaggatggtcctgct
ggtctgagaggcttcccaggagagcgaggccttccaggcactgctggtggacccggcttg
aaaggaaatgaaggtccagctggccctcctggccctgcaggctctcctggcgagcgaggt
gcagcaggatcagggggccccattggtcccccgggacgtccaggcccacaaggtccccct
ggagcagcaggagagaaaggcgtaccgggcgagaaaggccctattggtcccactggtcgt
gatggggtgcagggccccgtggggcttcctggtcctgcaggacccccaggcgtggctgga
gaggatggagacaagggtgaagtgggagaccctggacagaagggaaccaaaggaaacaag
ggtgaacatggccctcctggacctcctggtcccatcgggcctgtggggcaacctggagct
gcgggagctgatggtgagcctggagctcggggaccccagggacactttggagccaaaggt
gatgaaggaacaagagggttcaatggacccccgggacccatcggcctacagggcctgcca
ggaccctctggggagaaaggagaaacaggagacggggggcctatgggaccccctggccct
ccaggacctcgaggccccgctggacccaatggtgctgatggcccacaaggttcccctgga
ggtgttggaaacttgggtccccctggagaaaagggtgaaccgggggagtcagggtctcca
ggcgtccagggcgagccgggcgtcaagggaccacgtggagagcgtggtgagaaaggagag
tctgggcaggcgggagaggctggaccaccggggcccaaaggccctacaggcgacaatggc
cccaaggggaaccctggtcctgttggctttcctggggaccctggcccccctggagaagct
ggcccacggggccaggatggtgctaagggagaccgaggcgaggatggcgagccaggacaa
cctggatcccctggtcccaccggggagaatgggccccctggaccccttggaaagcgggga
cctgctggcactcctggtccagaaggacggcaaggagagaagggagctaagggggaccct
ggtgctgtgggggccccgggaaagacaggccctgtgggtcctgcaggcctagcaggaaag
cccggccccgatggtcttcgggggctcccgggttcagtgggtcagcaaggccgccctgga
gccacaggccaggctgggcccccaggtcctgtgggacccccagggcttcctggcctccgg
ggtgatgctggagccaagggggaaaagggtcacccaggtctcatcggactgattgggccg
actggagagcaaggcgagaagggcgaccgtggcctccctggacctcagggctcacccgga
cagaagggagagacgggtatcccaggagcatctggccccatcggtcctggagggcctcct
ggcctgcctggaccctctggccccaaaggagccaaaggagccacaggcccagctggaccc
aagggagagaagggtgtccagggccctccaggacacccgggccccccgggagaggtgatc
cagccactgcccatccagatgcccaagaagacccgccgttccgtggacggaagcaaactg
atacaggatgaggaggctgtgcccactggcggtgctccgggcagtcctgcggggctggag
gagatctttggctcactggactctctgcgggaggagatcgagcagatgaggaggccggcg
gggacccaggacagccctgctcgcacctgccaggacttgaagctgtgccacccggagctt
cctgatggagagtactgggttgaccctaaccagggctgtgctcgggatgccttccgggtg
ttctgcaacttcacagcaggaggggagacgtgtgtcacacccagggatgacgtcacacag
ttctcctacgtggactccgagggctccccagtgggcgtggtccagctcaccttcctgcgg
ctgctcagcgtctctgcccaccaggatgtctcctacccttgctctggagtatcccaggat
ggtcccctgaaactccgaggggccaacgaggatgagctgagccctgagaccagcccttat
gtcaaggagttcagagatggctgtcagacccagcaaggccggacggtgttggaggtgcgc
acgcctgtactggagcagctgcccgtgctggatgcctccttcgcagacctgggggccccc
acaagacggggaggggtgcttctggggcctgtctgcttcatgggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (15)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (23)   
   RefSeq(nuc) (15)   
   GenBank (4)   
   EMBL (4)   
Protein domain (5)   
   Pfam (5)   
All databases (94)   

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