KEGG   Mus musculus (house mouse): 12834
Entry
12834             CDS       T01002                                 
Symbol
Col6a2, Col6a-2
Name
(RefSeq) collagen, type VI, alpha 2
  KO
K06238  collagen type VI alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04820  Cytoskeleton in muscle cells
mmu04974  Protein digestion and absorption
mmu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    12834 (Col6a2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    12834 (Col6a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    12834 (Col6a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    12834 (Col6a2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    12834 (Col6a2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    12834 (Col6a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    12834 (Col6a2)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    12834 (Col6a2)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   12834 (Col6a2)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   12834 (Col6a2)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   12834 (Col6a2)
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3 Ins134_P3_kin_N
Other DBs
NCBI-GeneID: 12834
NCBI-ProteinID: NP_666119
MGI: 88460
Ensembl: ENSMUSG00000020241
UniProt: Q02788
Position
10:complement(76431590..76459464)
AA seq 1034 aa
MTTIKMLQGPLSVLLIGGLLGVLHAQQQEAISPQEQEAVSPDISTTERNNNCPEKADCPV
NVYFVLDTSESVAMQSPTDSLLYHMQQFVPQFISQLQNEFYLDQVALSWRYGGLHFSDQV
EVFSPPGSDRASFTKSLQGIRSFRRGTFTDCALANMTQQIRQHVGKGVVNFAVVITDGHV
TGSPCGGIKMQAERAREEGIRLFAVAPNRNLNEQGLRDIANSPHELYRNNYATMRPDSTE
IDQDTINRIIKVMKHEAYGECYKVSCLEIPGPHGPKGYRGQKGAKGNMGEPGEPGQKGRQ
GDPGIEGPIGFPGPKGVPGFKGEKGEFGSDGRKGAPGLAGKNGTDGQKGKLGRIGPPGCK
GDPGSRGPDGYPGEAGSPGERGDQGAKGDSGRPGRRGPPGDPGDKGSKGYQGNNGAPGSP
GVKGGKGGPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGSKGAK
GDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGTPG
EKGEPGPPGPEGGRGDFGLKGTPGRKGDKGEPADPGPPGEPGPRGPRGIPGPEGEPGPPG
DPGLTECDVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRL
GAIAKDPKSETGTRVGVVQYSHEGTFEAIRLDDERVNSLSSFKEAVKNLEWIAGGTWTPS
ALKFAYNQLIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCDRDVTVTAIGIGDMFHE
THESENLYSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELYVA
QCTQRPVDIVFLLDGSERLGEQNFHKVRRFVEDVSRRLTLARRDDDPLNARMALLQYGSQ
NQQQVAFPLTYNVTTIHEALERATYLNSFSHVGTGIVHAINNVVRGARGGARRHAELSFV
FLTDGVTGNDSLEESVHSMRKQNVVPTVVAVGGDVDMDVLTKISLGDRAAIFREKDFDSL
AQPSFFDRFIRWIC
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgactactatcaagatgctccagggtcctctttctgtgctcctgattgggggactcttg
ggggtcctccatgcccagcagcaggaagccatctcaccccaggagcaggaagctgtctca
ccagacatctccaccactgaaaggaacaacaattgtccagagaaggccgactgcccagtc
aacgtgtatttcgtgttggacacctcagagagcgtggccatgcagtccccgacagacagc
ctgctctatcatatgcagcagttcgtaccgcagtttatcagccagctgcagaacgagttc
tacctggaccaggtggccctgagctggcgctacggtggtctacacttctcggaccaagtg
gaggtgttcagcccaccgggcagtgaccgggcctccttcactaagagcctacaaggcatc
cgctccttccgcaggggcaccttcactgactgtgcattggctaacatgacgcagcagatc
cggcagcacgtaggcaagggggtggtcaacttcgccgtggtcatcactgacggccacgtc
acgggcagtccgtgtgggggcatcaagatgcaggctgagcgtgcccgtgaagagggcatc
cggctcttcgctgtggcccctaacaggaacctaaacgaacaaggcctgagggacatcgct
aactctccacatgagctctaccgtaacaactacgccaccatgcgacccgactctaccgag
attgaccaggacaccatcaaccgcatcatcaaggtcatgaaacatgaagcctatggagag
tgctacaaggtgagctgcctggagattcctggaccccacggacccaagggttaccgagga
cagaagggtgccaagggcaacatgggtgaaccaggagagcctggacagaaaggacgacag
ggagaccccggcatcgaaggccccattggattcccgggaccgaagggtgtgcctggcttc
aagggagagaagggtgaatttggatcggatggtcggaagggagcgcctggcctagctggc
aagaatggaacagatggacagaagggcaaactgggccgcattgggcctcctggttgcaag
ggagaccccggaagtcggggccccgatggataccctggagaagctggaagcccaggcgag
cgaggagaccagggtgccaagggggactctggccgcccaggacgcaggggaccaccagga
gatcctggagacaaaggaagcaagggatatcaaggcaacaacggagcccctggaagcccg
ggagtgaaaggaggcaagggagggcctggcccccgtggaccaaaaggagagcctggacgc
agaggagaccccgggaccaagggcggccccggcagcgatggtccaaagggagagaaggga
gaccctggtcctgaggggcctcgaggcctggctggagaagttggcagtaaaggagccaag
ggagacagaggtttgcctggacccagaggcccccagggggctcttggagagccaggaaag
cagggatctcgaggagaccctggtgacgccggacctcgaggggattcaggacagccgggc
cccaagggcgatcctggaaggcctggattcagctacccgggacctcgagggacacccggt
gaaaaaggcgagcccggtccaccaggccctgagggaggccgaggagactttggtctgaaa
ggaacacccggacggaagggagataaaggggagccagctgatcctggtccccctggtgaa
cctggccctcgggggccaagaggaatcccaggacctgagggagaacccggccctccagga
gaccctggtctcacggaatgtgatgtcatgacctatgtgagggagacctgtggatgctgc
gactgtgagaagcgctgtggtgccctggatgtggtcttcgtcatcgacagttctgagagt
attggctacaccaacttcaccttggagaagaactttgtcatcaatgtggtcaacaggcta
ggtgccattgccaaggaccccaagtcagaaacaggcacacgtgtgggtgtggtgcagtac
agccacgagggcacctttgaggccatccggctggacgacgagcgagtcaactccctgtct
agtttcaaggaggctgtcaaaaaccttgaatggatcgccggtggcacttggacgccctct
gccctcaagtttgcctataatcagctcatcaaagaaagccggcgccagaagacccgggtg
ttcgcagtggtcatcacggatgggcgccatgacccccgagatgatgacctcaatcttcgg
gcactgtgtgaccgagatgtcactgtgacagccattggcatcggtgacatgttccacgag
actcatgagagtgagaacctctactccattgcctgtgacaagccacagcaagtgcgcaac
atgacgctgttctctgacctggtggccgagaagttcatcgatgacatggaagacgtcctt
tgtccagacccccagatcgtgtgtccagaacttccctgccaaacagagctctatgtggcc
cagtgcacacaacggcccgtggacattgtcttcctgctggatggctcggagcggctgggc
gagcagaacttccacaaggtgcggcgcttcgtggaggacgtgtcccggcgcctgactctg
gcccggagggatgatgacccactcaacgcccgcatggctctgttgcaatatggcagccag
aatcagcaacaggtggccttcccactgacctacaacgtgaccaccatccacgaggccctg
gagagggccacctacctcaattccttttctcacgtgggcacgggcatcgtacacgccatc
aacaacgtggtgcggggggcacggggtggggcgcggcgccacgcagagctctccttcgtc
ttcctcacggacggtgtcaccggcaatgacagcctggaggagtcagtgcactctatgcgt
aagcagaacgtggtgcccactgtggtcgctgtgggcggcgacgtggacatggatgtgctt
actaagatcagcctgggtgacagggcggccatcttccgggagaaagactttgacagtctg
gcccagcccagcttctttgacaggttcatccgctggatctgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (38)   
   RefSeq(nuc) (2)   
   GenBank (18)   
   EMBL (18)   
Protein domain (5)   
   Pfam (5)   
All databases (80)   

Download RDF
DBGET integrated database retrieval system