KEGG   Mus musculus (house mouse): 12845
Entry
12845             CDS       T01002                                 
Symbol
Comp, TSP5
Name
(RefSeq) cartilage oligomeric matrix protein
  KO
K04659  thrombospondin 2/3/4/5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04145  Phagosome
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04820  Cytoskeleton in muscle cells
mmu05144  Malaria
mmu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    12845 (Comp)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    12845 (Comp)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    12845 (Comp)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    12845 (Comp)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    12845 (Comp)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    12845 (Comp)
  09174 Infectious disease: parasitic
   05144 Malaria
    12845 (Comp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    12845 (Comp)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    12845 (Comp)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    12845 (Comp)
Membrane trafficking [BR:mmu04131]
 Endocytosis
  Phagocytosis
   Opsonins
    12845 (Comp)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   12845 (Comp)
  Exosomal proteins of colorectal cancer cells
   12845 (Comp)
  Exosomal proteins of bladder cancer cells
   12845 (Comp)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   12845 (Comp)
SSDB
Motif
Pfam: TSP_C TSP_3 EGF_CA EGF_3 COMP cEGF EGF_MSP1_1
Other DBs
NCBI-GeneID: 12845
NCBI-ProteinID: NP_057894
MGI: 88469
Ensembl: ENSMUSG00000031849
UniProt: Q9R0G6
Structure
Position
8:70826186..70834721
AA seq 755 aa
MGPTACVLVLALAILRATGQGQIPLGGDLAPQMLRELQETNAALQDVRELLRQQVKEITF
LKNTVMECDACGMQPARTPGLSVRPVPLCAPGSCFPGVVCSETATGARCGPCPPGYTGNG
SHCTDVNECNAHPCFPRVRCINTSPGFHCEACPPGFSGPTHEGVGLTFAKSNKQVCTDIN
ECETGQHNCVPNSVCVNTRGSFQCGPCQPGFVGDQTSGCQRRGQHFCPDGSPSPCHEKAN
CVLERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQED
VDRDGIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSDSDKWGDACDNCRSKKNDDQKDT
DLDGRGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVD
HDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRD
NCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDVCPENAEVTLTDFRAFQTVVLDPE
GDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFG
YQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTAS
QVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTAMRGGRL
GVFCFSQENIIWANLRYRCNDTIPEDYESHRLQRV
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgggccccactgcctgcgttctagtgctcgccctggctatcctgcgggcgacaggccag
ggccagatcccgctgggtggagacctggccccacagatgctgcgagaacttcaggagact
aatgcggcgctgcaagacgtgagagagctgttgcgacagcaggtcaaggagatcaccttc
ctgaagaatacggtgatggaatgtgatgcttgcggaatgcagcccgcacgcactccaggc
ctgagcgtgcggccagtgccgctctgcgcacccggctcctgcttccccggcgtagtctgc
tccgagacagctacgggcgcgcgctgcggcccctgccctcctggctacaccggcaacggc
tcgcactgcaccgacgttaatgagtgcaatgctcacccctgtttcccgcgggtgcggtgc
atcaataccagccctggctttcactgcgaagcctgtccccctgggttcagcggacccacc
cacgagggcgtgggactgaccttcgctaagtccaacaaacaagtttgcacggatattaat
gagtgtgagaccgggcagcacaattgcgttcccaactccgtgtgcgtcaacacccggggc
tccttccagtgcggcccctgccagcccggtttcgtgggcgaccagacgtcaggctgccag
cggcgtgggcagcacttctgccccgatgggtcacccagcccgtgccatgagaaagcaaac
tgcgtcctggagcgggatggctcgaggtcttgcgtgtgtgcagttggctgggccggcaac
gggctcctgtgcggccgcgacacggacctggacggttttcctgacgagaagcttcgctgc
tcagagcgccagtgtcgcaaggacaactgcgtgacggtgcccaattcggggcaggaggat
gtggaccgggacggcatcggagatgcttgtgacccggatgcggacggggatggagtccct
aacgagcaagacaattgcccgctggttcgaaacccagaccagcgtaactcggacagtgat
aagtggggagatgcctgcgacaactgccggtccaagaagaatgacgatcagaaagataca
gacctggatggccggggcgatgcctgcgacgacgacatagatggcgaccgaatacgaaat
gtagctgacaactgtccccgggtgcccaactttgaccagagtgacagtgatggtgatggt
gttggggatgcctgtgacaactgtccccagaaagataacccagaccagagggatgtggac
cacgactttgtgggtgatgcctgtgatagtgaccaagaccaggatggggatggtcaccag
gactcccgggacaactgccccacagtacccaacagtgcccagcaggactcagatcatgat
ggcaagggcgatgcctgtgatgacgatgatgacaatgacggagttcctgatagccgggac
aactgccgcttggtgcctaaccctggccaagaggacaatgaccgggatggcgtgggtgac
gcgtgtcagggtgacttcgatgctgacaaggttatagacaagatcgatgtgtgccccgag
aacgccgaggtcaccctcaccgacttcagggccttccagacggttgtgttggaccccgag
ggtgatgcgcagatcgatcccaactgggtggtgctcaatcagggaatggagatcgttcag
accatgaacagtgaccctggcctggctgtgggttacacagccttcaacggcgtggacttc
gagggcacattccatgtaaacaccgccactgatgatgactatgctggtttcatcttcggc
taccaagacagctccagtttctacgtagtcatgtggaaacagatggagcagacgtactgg
caggccaatcccttccgggctgtggctgagccagggattcagctcaaggctgtcaagtcc
tctacaggtcccggggaacagctccgaaacgcactgtggcacacgggggacacagcatcc
caggtgcggctgctgtggaaggatcctcgaaacgtgggctggaaggataaaacatcctac
cgctggttcctgcagcaccggcctcaagttggctacatcagggtgcggttctatgagggt
cctgagctagtagctgacagcaatgtggtgttggacacggccatgcgtggtggccgcctg
ggtgtcttctgcttctcccaagagaacatcatctgggctaacctgcgctaccgttgcaat
gatacaatccctgaggactacgagagtcaccggctgcagagagtctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
3D Structure (5)   
   PDB (5)   
Protein domain (7)   
   Pfam (7)   
All databases (67)   

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