KEGG   Mus musculus (house mouse): 12941
Entry
12941             CDS       T01002                                 
Symbol
Pcdha5, Cnr6, Crnr6
Name
(RefSeq) protocadherin alpha 5
  KO
K16493  protocadherin alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    12941 (Pcdha5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    12941 (Pcdha5)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    12941 (Pcdha5)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   12941 (Pcdha5)
SSDB
Motif
Pfam: Cadherin Cadherin_tail Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 12941
NCBI-ProteinID: NP_034089
MGI: 1298371
Ensembl: ENSMUSG00000103092
UniProt: Q91Y15
Position
18:37093329..37320716
AA seq 934 aa
MVYFQRGSPGFRRLLISFVLLAAWEAGSGQLHYSIPEEAKHGTFVGRIAQDLGLELTELV
PRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VEVKDINDNPPKFSRPEQRLFILESRMPDSRFPVEGASDLDIGANAALSYKINPNEYFDL
DVKRNEEETSVLQLVLKKPLDREETQEHRLLLIAIDGGKPELTGTVQLLIDVLDANDNAP
EFDKSIYNVRLLENTPNGTLVIKLNASDADEGINKEILYFFSNLVLDDVKSKFTIDSSSG
EIKVKGELDYEDCKVYEINIDAVDRSAFPLAGHCKIIVKLVDVNDNVPEMAITSIFLPIK
EDAPLATVIALISVSDRDSGANGQVTCSLTPHIPFKLVSTFKNYYSLVLDRALDRETIAN
YDVVVTARDGGSPSLWATASVSVEVADVNDNVPAFAQPEYTVFVKENNPPGAHIFTVSAM
DADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDA
GVPALGSNVTLQVFVLDENDNAPTLLGPQGSGGTIELLSRSVSSGHVVAKVRAVDADSGY
NAWLSYELQPATGAVRSPFRVGLYTGEISTTRVLDEADMPRQRLLVLVKDHGEPPLTATA
TFLVSLVENSQTPKVSSRVLVGTSGSDSTLIDVNVYLIIAICAVSSLLVLTLLLYTAIRC
SATPTDGACAPGKPVLVCSSAVGTWSYSQQRRQRVCSGEGPPKTDLMAFSPSLPQGPSST
ENPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSP
PVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPANNQIDKSDFITF
GKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggtatatttccagcgaggaagtccgggatttcggcgcctgctgatctcctttgtgctt
ctcgcagcctgggaggcagggagcggccagctccactactccatccccgaggaggccaaa
cacggcaccttcgtgggccgcatcgcgcaggacctggggctggagctgacggagctggtg
ccccgcctgttcagagtggcgtccaaggaccgcggggaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgtgggcggagcgcg
gagtgtagcatccacctggaggtgatcgtggacaggccgctgcaggttttccacgtggag
gtggaggtgaaggacattaacgacaacccgcctaaattctcacgacctgaacaaagatta
tttattttagagtcaagaatgccagactcgcggtttccggtagagggcgcatctgatttg
gatataggagccaatgcagccttgagttataagataaatcctaatgaatattttgacttg
gatgttaaaagaaacgaagaagaaacaagcgttttacaactagttttgaagaagccccta
gatagagaagaaacccaagagcatcgtttgttgctcattgcaattgatggagggaaacct
gaactaacaggtactgttcagttactgattgatgtgttggatgcaaatgataatgctccg
gagtttgataaatctatttataatgttagattgttagaaaatacacccaacgggacatta
gtcattaaactcaatgcttcagatgcggatgagggaattaataaagaaatactgtatttc
tttagtaatcttgttcttgacgatgtaaaatctaaatttacgatagattcttccagtgga
gaaataaaagttaagggcgaactggattacgaagactgtaaagtatatgaaattaatatt
gatgcagtggacagaagcgcattcccactagcaggacactgcaaaattatagtgaaacta
gtggatgtaaatgataacgtgcctgagatggccataacctccatttttttgcctatcaaa
gaggatgctccattggcgactgtcatcgctctgattagcgtgtcagatcgtgactcaggc
gccaatgggcaggtgacctgctccttgacaccccacatccccttcaagctggtgtccact
ttcaagaattactattcgcttgtactggacagagctctggaccgagagactatcgctaac
tacgacgttgttgtgaccgctcgcgatggaggctcgccctccttgtgggccacggccagc
gtgtccgtggaggtggctgacgtgaacgacaacgtgcctgcgtttgcgcagcccgaatac
actgtgttcgtgaaggagaacaacccgcctggtgcgcacatcttcacggtgtcagcgatg
gacgctgatgcacaggagaacgcgctggtgtcctactcgctggtggagcggagggtgggc
gagcgcttgctgtcgagctatgtgtctgtgcacgcggagagcggcaaggtgtttgcgctg
cagcctctggaccatgaggagctggagctgctgcagttccaggtgagcgcgcgggatgct
ggtgtgcctgccctgggcagcaatgtgactctgcaggtgtttgtgctggatgagaacgac
aacgcacccacgctgctggggcctcagggtagcggaggaactattgagttgttgtccagg
tcagtgagttctggccatgtggttgcgaaggtgcgtgcagtggacgcggattctggctac
aacgcgtggctgtcttatgagttgcagcctgcgacaggtgctgtgcgcagcccgttccgc
gtggggctatacactggtgagatcagcacaactcgtgttctggatgaagcggacatgccg
cgtcaacgcttgttggtgctggtgaaggatcacggcgagccacctctgacagccacggcc
actttcctggtgtctcttgtggagaacagccagaccccgaaggtctcatccagggtgttg
gttggaacctctggttcagactccacgctgatagatgtcaacgtgtacctaatcatcgcc
atttgtgcggtttccagtctgttggtgctcaccctgcttctgtacacagcgattcgctgc
tcagcgacgcccactgatggagcctgtgctccaggaaagccagtgctggtgtgctccagc
gcggtagggacctggtcatactcgcagcagaggcgacagagggtgtgctctggagaaggt
ccacccaagaccgacctcatggccttcagtcccagcctacctcagggacccagctctaca
gagaatccccggcagcccaaccctgactggcgctactctgcctcgctaagagcaggcatg
cacagctctgtgcacctggaggaggctggcattctacgggctggtccaggagggcctgat
cagcagtggccaacagtatccagtgcaacaccagaacctgaggcaggagaggtgtcccct
ccggtgggcgccggtgtcaacagcaacagctggacctttaaatacggaccaggcaacccc
aaacagtccggtcccggtgagttgccagacaaattcattatcccaggatctcctgcaatc
atctccatccggcaggagcctgctaacaaccaaattgacaaaagcgattttataaccttc
ggcaaaaaggaggagaccaagaaaaagaagaaaaagaagaagggtaacaagacccaggag
aaaaaagagaaagggaacagcacgacggacaacagtgaccagtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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