KEGG   Mus musculus (house mouse): 12942
Entry
12942             CDS       T01002                                 
Symbol
Pcdha11, A830022B16Rik, Cnr7, Crnr7
Name
(RefSeq) protocadherin alpha 11
  KO
K16493  protocadherin alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    12942 (Pcdha11)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    12942 (Pcdha11)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    12942 (Pcdha11)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   12942 (Pcdha11)
SSDB
Motif
Pfam: Cadherin Cadherin_tail Cadherin_2 Cadherin_3 Cadherin_C_2
Other DBs
NCBI-GeneID: 12942
NCBI-ProteinID: NP_034090
MGI: 1298372
Ensembl: ENSMUSG00000102206
UniProt: Q91Y19
Position
18:37143911..37320710
AA seq 950 aa
MLSFQRRGSCTLPPLRWLLLLAAWEAGSGQLHYSIPEEAKHGTFVGRIAQDLGLELTELV
PRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VEVRDINDNPPVFPLREQRLLISESKQPDSRFPLEGASDADIGENAVLVYRLSQNEYFSL
EPPINSKQTKRPSLILKKVLDREKTPELNLLLTATDGGKPELTGTVQLWVRVLDVNDNDP
VFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIKPTGRHLFTLDEKNGE
LRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEILDTNDNSPEVTLTSLSLPVRE
DAQPNTVIALISVSDLDSGINGQVTCSLTPNVPFKIVSTFKNYYSLVLDSSLDRERVSTY
DLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAMD
ADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDAG
VPALGSNVTLQVFVLDENDNAPTLLPHGAVGAGGAVSELVSRSVGSGHVVTKVRAVDADS
GYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRALDEVDSPRQTLLVLVKDHGEPALTA
TATVLVSLVESGQAPKSFSQASGRASAPEASLVDVNVYLIIAICAVSSLLVLTLLLYTAL
RCSALPMVNEATGGPGKPMLVCSSEVGSWSYSQQRRQRVCSGEVLPKTDLMAFSPSLPPN
LGRDERERQESESSHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
QEPANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgttaagttttcagagaaggggatcctgcactctgccaccgctgcgctggcttcttctc
ctcgctgcctgggaggcagggagcggccagctccactactctatcccagaggaggccaaa
cacggcaccttcgtgggccgcatcgcgcaggacctggggctggagctgacggagctggtg
ccccgcctgttcagggtggcgtccaaggaccgcggggaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcgggcggagcgcg
gagtgcagcatccacctggaggtgatcgtggacaggccgctgcaggttttccacgtggag
gtggaggtgagggacattaatgacaacccgccagtgtttcctcttagagaacaaaggctg
cttatttctgaatccaagcaaccagactcgcgttttccgctagagggagcgtctgatgcg
gacataggagagaacgctgtattggtctacagattaagtcaaaacgagtatttttcttta
gaaccaccaatcaatagtaagcaaactaaaagaccgtcacttatattaaagaaggttcta
gatcgggagaaaaccccggaacttaatttgctattaacagccacagatgggggaaaaccg
gagctcacgggtacagttcagctttgggttcgtgtcttagatgttaacgacaatgatcca
gtgttcgatcatttagaatacaaggtaagaataatggaaaatgctgctaaagaaactctt
gtcataacgttgaacgccacggatctagacgaaggtgcaaacgggcaactggtatactct
ttgatgtccattaagcccactgggaggcatttatttaccctagatgaaaaaaatggagaa
ttgagggtcaacgggactttagattatgaagagaacaaattgtatgaaatagaagtgctg
gccacggataaaggaacacctccaatggtaggtcactgtgtagtcttggtagaaatctta
gacaccaatgacaactcccctgaagtgacattaacttcgctgtccctcccagtaagagag
gatgcccagccaaatacagtcattgctttaattagcgtatccgaccttgattctggaatc
aatggccaagtgacctgctctcttacacccaatgtccccttcaagattgtatccaccttt
aaaaattattattctctggtactggatagcagtctggaccgcgagagagtgtcaacttat
gatttggttgtgatagcgcgggacgggggctcgccttcactgtctgccactgtcagcgtg
tccgtggaagtggctgacgtgaacgacaatgctccagtgttcgcgcagcctgaatacacg
gtgttcgtgaaggagaacaacccgcctggagcgcacatctttacagtgtcagcgatggat
gcggatgcgcaggagaacgcgctggtgtcctactcgctggtggagcggagggtgggcgag
cgcttgctgtcgagctatgtgtctgtgcacgcggagagcggcaaggtgttcgcgctgcag
cctctggaccatgaggagctggagctgctgcagttccaggtgagcgcgcgggatgctggt
gtgcctgccctgggcagcaatgtgactctgcaggtgtttgtgctggatgagaatgacaat
gcgcccacgctgctgcctcatggagctgttggagctggtggggcagtgagcgagcttgtg
tctcggtcggtgggatcgggccatgtagtcaccaaggtgcgggcagtggatgccgactct
ggttacaatgcttggctgtcatatgaagtacagttgggaacaggtggcgtacgcagcccc
ttccgcgtgggtctgtacacgggtgagatcagcacgacgcgtgccttggatgaggtggac
tctcctcggcagactctattggtgctggtgaaggaccatggtgagccagcactgacagcc
actgcaactgttttagtgtctcttgtggaaagcggccaagctccaaagtccttttcacag
gcatcaggtcgtgcttcagccccggaggcatcgctggtggatgtcaacgtgtatttgatt
atcgccatctgcgcagtgtccagcctgttggtactcacgctgctgctgtatacagcgctg
cgctgctcagcattgcctatggtcaatgaggccactggggggcctggaaagcccatgctg
gtgtgctccagcgaggtggggagctggtcctactcacagcagaggcggcagagggtgtgc
tctggggaagttcttcccaagaccgacctcatggcatttagccccagcctacctcccaac
ctgggtagagatgaaagggaaagacaggagtcagagtcaagtcaccctggacagccccgg
cagcccaaccctgactggcgctactctgcctcgctaagagcaggcatgcacagctctgtg
cacctggaggaggctggcattctacgggctggtccaggagggcctgatcagcagtggcca
acagtatccagtgcaacaccagaacctgaggcaggagaggtgtcccctccggtgggcgcc
ggtgtcaacagcaacagctggacctttaaatacggaccaggcaaccccaaacagtccggt
cccggtgagttgccagacaaattcattatcccaggatctcctgcaatcatctccatccgg
caggagcctgctaacaaccaaattgacaaaagcgattttataaccttcggcaaaaaggag
gagaccaagaaaaagaagaaaaagaagaagggtaacaagacccaggagaaaaaagagaaa
gggaacagcacgacggacaacagtgaccagtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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