KEGG   Mus musculus (house mouse): 13047
Entry
13047             CDS       T01002                                 
Symbol
Cux1, CDP, Cutl1, Cux, Cux-1
Name
(RefSeq) cut-like homeobox 1
  KO
K09313  homeobox protein cut-like
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    13047 (Cux1)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain CUT
    13047 (Cux1)
SSDB
Motif
Pfam: CUT Homeodomain Homeobox_KN ATG17_like HTH_23
Other DBs
NCBI-GeneID: 13047
NCBI-ProteinID: NP_001278163
MGI: 88568
Ensembl: ENSMUSG00000029705
UniProt: P53564 H3BK24 Q5BL05
Position
5:complement(136276989..136596429)
AA seq 1504 aa
MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALSKRSKEAEAAFLTVYKRLIDVPDPVPALDVGQQLEIKVQRLH
DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKSQAETIALEKEQKLQ
NDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEETTAKADEI
EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVAIEVLTRSSLEVE
LAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLEEKLKGQADY
EEVKKELNTLKSMEFAPSEGAGTQDSTKPLEVLLLEKNRSLQSENATLRISNSDLSGSAR
RKGRDQPESRRPGPLPASPPPQLPRNTGEQVSNTNGTHHFSPAGLSQDFFSSNLASPSLP
LASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSTIFSTGPYSTNSISSPSPLQQSPDVNG
MAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILA
RPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRASETGSDEAIKS
ILEQAKRELQVQKTAEPVQTSSTSSSGNSDDAIRSILQQARREMEAQQAALDPALKPAPL
SQPDLTILTPKHLSASPMSTVSTYPPLAISLKKTPAAPETSTAALPSAPALKKEAQDVPT
LDPPGSADAAQGVLRPMKSELVRGSTWKDPWWSPIQPERRNLTSSEETKADETTASGKER
AGSSQPRAERSQLQGPSASAEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSPI
VPMAKPAKPSVPPLTPEQYEVYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQG
SVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVASLQDPL
QQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPAIETSKEGKPPEPSDPP
ASDSQPTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGL
TQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSS
VSDSQPCEPPSVGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEE
LATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSSRAAPSSEGD
SCDGVEATDAEEPGGNIVATKSQGGLAEVAAAPADREEATQPAEKAKAQPLCSGTPGQDD
GEDASRPRPLPEGLADAPAPVPSLAAPAAGEDAATSATAPATATEAPGAARAGPAERSSA
LPSTSAPANAPARRPSSLQSLFGLPEAAGARDNLVRKKKAANLNSIIHRLEKAASREEPI
EWEF
NT seq 4515 nt   +upstreamnt  +downstreamnt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagagaacttgatgccaccgcaacagtattggcaaacaggcaagatgagagcgaacag
tccagaaagcggctcattgagcagagccgagaattcaagaagaacactccagaggattta
cgcaagcaggtagcaccactgctaaagagcttccaaggggagattgatgcactgagtaaa
agaagcaaagaagcagaggcagccttcttgactgtgtacaagagactaattgatgttcca
gatccggtaccagccctggacgtcgggcaacagctggaaataaaagtgcagcgtctacac
gacattgaaacagagaaccagaaacttagggaaacactagaagagtacaacaaggagttt
gctgaagtgaaaaatcaagaggttacgataaaagcacttaaggagaaaatccgagaatac
gagcagaccctgaagagtcaggccgagaccattgctctggagaaagagcagaagctacaa
aatgattttgcagagaaggagagaaagctgcaagagacacagatgtccaccacctcaaaa
ctggaggaagctgagcacaaactccagactctgcaaacagccctggaaaaaactcgaaca
gaattatttgacctgaaaaccaaatatgatgaagaaactactgcaaaggccgatgagatc
gagatgatcatgaccgaccttgaacgagccaaccagagggcagaggtggcacagagagaa
gcagagactttaagggaacagctctcatcggccaaccactctctccaactggcctcgcag
atccagaaggctccagatgtggccatagaggtgctgacccgatccagcctagaagtagag
ttggctgccaaagagcgggagatcgcccagctggtggaagatgtgcagcgactccaggcc
agcctcaccaagctacgtgagaattccgccagccagatctcacagctggagcagcaactg
aatgccaagaatagcacactcaaacaactggaagaaaaactcaaaggccaggctgactat
gaagaagtgaagaaagagctgaacaccctgaagtccatggagtttgcaccatcggaggga
gcagggacacaggactctaccaagcccctggaggttttactcctggagaagaaccgctcg
ctgcagtccgagaatgccacgctgcgcatctccaacagtgacctgagcgggtcagccagg
agaaaagggagagaccagcctgagagtcggcgcccgggacccttgccggcctcccctcct
cctcagttgccccgcaacacgggggaacaggtttccaatactaacggtacacaccacttc
tcaccagcggggttaagtcaagactttttcagctcaaacctggccagccccagcctaccc
ctggcttctacaggaaagtttgcactaaactctcttctccagcgacagctaatgcagtcc
ttctactccaaggccatgcaggaagccggaagcacaagcaccattttttcaacaggtcct
tacagcacaaactccatatcttccccaagtccattacaacaaagcccagatgtaaatggc
atggccccatctcccagccaatcagaaagtgctgggagcatctcagagggcgaggaaatt
gataccgcagagatcgcccggcaggtcaaagagcagctcatcaagcacaacattggccag
cgcatcttcggacattacgtcctgggactgtcgcaaggctctgtgagcgagatcctggcc
cggcccaagccctggaacaagctgactgtccgtggcaaggagccattccacaagatgaag
cagttcctgtctgatgagcagaacatcctggcactccgtagcatccaaggcagacagaga
ggtaacatcactacccggatccgagcatctgagactggttctgatgaagccatcaagtcc
atcctggaacaagccaagagggaactacaagtgcagaaaaccgctgagccagtccagaca
tcttccacgtccagcagtgggaactctgacgatgccatccgctccatcctacagcaggcc
cgccgggaaatggaggcccagcaggctgcccttgaccctgccttaaagccagcaccactg
tcccagcccgacctcaccatcctcacccccaagcacctgtctgcctcacccatgtctact
gtgtccacttacccgcctcttgctatctccctgaagaaaacccctgcagcacctgagacc
agtaccgcagccttgcccagtgccccagctctcaaaaaagaggctcaggatgtacccaca
ctggacccaccaggatcagctgatgctgcccagggagtgctgaggccgatgaagagtgag
ctagtccgtggcagcacctggaaggatccctggtggagccctatacagcctgaaagaaga
aacctcacttcttccgaagagaccaaggccgatgaaacaactgcaagcgggaaagaaagg
gcaggcagcagccagcctcgggctgagcgcagccagcttcagggaccctcagcatccgca
gagtactggaaagagtggccaagcgctgagtccccatactcccagagctcagagctgagc
ctcactggagccagccgcagtgagacaccccagaatagccctctgccctcttccccaatt
gtgcccatggcgaagccagccaagccttcagtgcccccgctgactcctgagcagtacgag
gtctacatgtatcaggaagtggacactatcgagctcactcggcaggtcaaagagaagctg
gccaagaacggcatttgccagaggatctttggggagaaggtactgggcctgtcccagggc
agtgtcagcgacatgctttcaaggccaaaaccatggagcaaactgacccagaaaggccga
gaacccttcatccggatgcagctctggctgaatggagagctgggccaaggtgttctgcca
gtgcaagggcaacagcaagggccagtcctccactccgtggcgtctctgcaggaccccctc
cagcagggctgtgtgagctcagaaagcactccaaagacctctgccagctgcagccctgcc
cctgagtccccaatgagttccagcgaatctgtgaagagtctcaccgagctggtccagcag
ccctgtcccgccattgagaccagtaaagaaggcaaaccaccagagcccagcgacccgcct
gcctcagactcccagcccacaacaccgctgcctctctctggacactcagccctcagcatc
caagaattagtagccatgtctcctgagctggacacgtatggcataaccaagagggtcaaa
gaggtgctgacagacaacaacctcggtcagcgcttatttggggagaccattttggggctc
acccagggttctgtctccgacctccttgcccgcccaaagccttggcataagcttagtctg
aaaggacgggaaccctttgtccgcatgcagctatggctgaacgaccccaacaatgtggag
aagctgatggatatgaagcggatggagaagaaagcctacatgaagaggcgacacagctct
gtcagtgacagtcagccttgtgagcccccctctgtgggtattgactatagccaaggcgcc
agcccccagccacaacaccagctgaagaaacctcgagtggtgctggctccagaggagaag
gaagcgctgaagcgagcatatcagcagaagccatacccatcaccaaaaaccatcgaggaa
cttgccacacaactcaacctgaagaccagcaccgtcatcaactggttccataattacagg
tctcggatccgcagagaactgttcattgaggagattcaagctggaagccagggccaggct
ggtgccagcgactcaccttcagctcgaagtagccgcgctgcacccagctcggaaggtgac
agctgtgacggcgtggaagccaccgacgccgaggagccaggtggcaacatagtggccacc
aagtctcagggagggctggcagaggtggccgcagccccggcagaccgggaagaagcgacg
cagccggcggagaaggcgaaggcacagccactatgctcggggaccccaggacaggacgac
ggtgaagacgcaagccggcctaggccacttcccgagggcctcgccgacgccccagcgcct
gtgccaagcctcgccgcacccgcggccggagaggacgccgctacctcagccactgccccg
gccacggccaccgaggcccccggggcggccagggcgggccctgccgagaggagttctgcg
ttgccaagcaccagcgcgcctgccaacgcgcctgcgcgaaggcctagctcactgcagagc
ctcttcggtctgcccgaggccgcgggcgcccgggacaacctggtgcggaagaagaaggct
gcgaacttgaacagcatcatccaccgcctggagaaggctgccagccgggaggagcccatc
gaatgggagttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (26)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (22)   
DNA sequence (98)   
   RefSeq(nuc) (22)   
   GenBank (38)   
   EMBL (38)   
Protein domain (5)   
   Pfam (5)   
All databases (194)   

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