KEGG   Mus musculus (house mouse): 13205
Entry
13205             CDS       T01002                                 
Symbol
Ddx3x, D1Pas1-rs2, Ddx3, Fin14
Name
(RefSeq) DEAD box helicase 3, X-linked
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04622  RIG-I-like receptor signaling pathway
mmu05161  Hepatitis B
mmu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    13205 (Ddx3x)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    13205 (Ddx3x)
  09172 Infectious disease: viral
   05161 Hepatitis B
    13205 (Ddx3x)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    13205 (Ddx3x)
   03041 Spliceosome [BR:mmu03041]
    13205 (Ddx3x)
   03036 Chromosome and associated proteins [BR:mmu03036]
    13205 (Ddx3x)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     13205 (Ddx3x)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     13205 (Ddx3x)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     13205 (Ddx3x)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    13205 (Ddx3x)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    13205 (Ddx3x)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-GeneID: 13205
NCBI-ProteinID: NP_034158
MGI: 103064
Ensembl: ENSMUSG00000000787
UniProt: Q62167 Q3TQX5
Position
X:13147261..13160222
AA seq 662 aa
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRGDSRGKSSFFGDRGSGSRGRFDDRGRGDYDGIGGRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAFEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgagtcatgtggcagtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagcaagcaaagggcgttatatccca
cctcatttaaggaacagagaagctactaaaggattctatgacaaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggatcacggggtgattcaagaggg
aagtctagcttctttggagatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cggggagactatgatggcattggtggccgtggagatagaagtggctttggcaaatttgaa
agaggtggaaatagtcgctggtgtgacaaatcagatgaagatgactggtcaaagccactc
ccaccaagtgaacgattggaacaggaactcttttctggaggcaatactgggattaacttt
gagaaatatgatgacattccagtcgaagcaacaggcaacaactgtcctccacacattgaa
agtttcagtgatgtcgagatgggagaaattattatgggaaacattgagcttactcgttat
actcgcccaactccagtgcagaagcatgctattcctattatcaaagagaaaagagacttg
atggcttgtgctcaaacaggctctggaaaaactgcagcatttctcttgcccatcttgagt
cagatctatgctgatggtccaggagaagctctgagggctatgaaggaaaatggaagatat
ggccgtcgtaaacagtatccaatctctttggtactggcaccaacgagagaattggcagtg
cagatctatgaggaagccagaaaattctcataccgatctagagtccgtccttgcgtggtt
tatggtggtgctgaaattggccagcagattcgagacttagaacgtggatgccacttgtta
gtagccactccaggacgtctagtggatatgatggagagagggaagatcgggttagacttc
tgcaaatacctggtgttagatgaagctgaccggatgttagatatggggtttgaacctcag
atacgaagaatagttgaacaagacactatgcctccaaaaggtgtccgccacactatgatg
tttagtgctacttttcctaaggaaatacagatgctggcccgtgatttcttagatgagtac
atatttctggctgtaggaagagttgggtctacttcagagaacatcacacaaaaagtggtt
tgggtggaggagatagacaaaaggtcatttctgcttgaccttctaaatgcaacaggcaag
gattccctgactctagtgtttgtggagaccaaaaagggggcagattcgctggaggatttc
ttataccatgaaggatatgcttgtaccagtatccatggagaccgttctcagagagatagg
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcagcaagaggactggatatttcaaatgtgaagcatgttattaattttgacctgcctagt
gatatcgaagaatatgtgcatcgcataggccgtacaggccgtgtgggaaaccttggtctt
gccacctcattctttaatgaaaggaatataaatatcacaaaggatttactggatcttctt
gttgaagcaaaacaagaagtgccttcttggttagagaacatggcttttgaacaccactac
aagggtagcagtcgtggacgttctaagagcagtcgatttagtggagggtttggtgccaga
gactaccgacagagtagcggtgccagcagttccagcttcagcagcagccgtgcaagcagc
agtcgaagtggtggaggtggccatggcggcagtcgaggatttggtggaggtggctacgga
ggcttttacaacagtgatggatatggagggaattataactcccagggggttgactggtgg
ggtaactga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (52)   
   RefSeq(nuc) (2)   
   GenBank (25)   
   EMBL (25)   
Protein domain (4)   
   Pfam (4)   
All databases (86)   

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