KEGG   Mus musculus (house mouse): 13211
Entry
13211             CDS       T01002                                 
Symbol
Dhx9, Ddx9, HEL-5, NDHII, RHA, mHEL-5
Name
(RefSeq) DExH-box helicase 9
  KO
K13184  ATP-dependent RNA helicase A [EC:5.6.2.6]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    13211 (Dhx9)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     13211 (Dhx9)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    13211 (Dhx9)
SSDB
Motif
Pfam: dsrm OB_NTP_bind Helicase_C DEAD HA2_N HA2_C Dicer_dimer nSTAND3 AAA_19 AAA_22 AAA_14 T2SSE ResIII
Other DBs
NCBI-GeneID: 13211
NCBI-ProteinID: NP_031868
MGI: 108177
Ensembl: ENSMUSG00000042699
UniProt: O70133 A0A087WPL5 Q3TF92 Q05BR6
Structure
Position
1:complement(153331506..153363464)
AA seq 1383 aa
MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIVPPPPILSDTSDSTASAAEGLPAPMGGPLPPHLAL
KAEENNSGVESSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWTL
ENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLA
AQSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLSPDLELQLQNVVQELDLEIV
PPPVDPSMPVILNIGKLAHFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYASTE
QISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKT
TQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESI
LPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVR
IVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKED
DGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLP
GWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAET
SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS
RARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE
LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGK
RLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKV
QLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGR
NALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD
GQIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNTIRQI
SRPSAAGINLMIGSVRYGDGPRPPKMARYDNGSGYRRGYGGGGYGGGGYGGGYGSGGFGG
GFGSGGGFGGGFNSGGGGFGSGGGGFGSGGGGFGGGGGGFSGGGGGGFGGGRGGGGGGFG
GSGGFGSGGGGYGVGGGGYGGGGGGGYGGGSGGYGGGGGGYGGGEGYSISPNSYRGNYGG
GGGGYRGGSQGGYRNNFGGDYRGSSGDYRGSGGGYRGSGGFQRRGYGGGYFGQGRGGGGG
GGY
NT seq 4152 nt   +upstreamnt  +downstreamnt
atgggtgacattaaaaattttctgtatgcctggtgtggcaaaaggaagatgactccagcc
tatgaaattagagcagtaggaaacaaaaacagacagaaattcatgtgtgaggttcgagta
gaagggtttaattatgctggtatgggcaattccaccaataaaaaggatgcacagagcaat
gctgccagagactttgttaactatttggttcgaataaatgaagtaaagagtgaagaagtt
ccagctgttgggattgtaccacccccacccatacttagcgacacctctgatagcacagca
agtgctgcagaagggttaccagcaccaatgggaggaccacttcctcctcatctggctctc
aaagcagaagaaaataattctggagttgagtcttctggctatggctctcctggacctact
tgggaccgaggagccaaccttaaagattactactcaagaaaggaagaacaagaagtacaa
gcgactctagagtcagaagaagtggatttaaatgctgggcttcatggaaattggacactg
gaaaatgctaaggctcgtctgaaccagtatttccaaaaagaaaagatccaaggagaatat
aagtacacccaagtgggtcccgaccacaacaggagctttattgcagaaatgaccatttat
atcaagcagcttggcagaaggattttcgcacgtgaacatggatctaataagaaattagca
gcacagtcatgtgccctctcacttgtccgacagctctatcatcttggagtgattgaggct
tactctgggcttacaaagaagaaagaaggagagagagtggagccttacaaagttttcctt
tctccagatttggagcttcagctgcaaaatgtggttcaagagctagatcttgaaattgtg
cccccacctgttgatccttctatgccagttatacttaacattgggaaattggctcatttt
gaaccatctcagagacaaaatgcagtgggagtggttccttggtcacctccacaatccaac
tggaatccttggacaagtagcaacattgatgagggaccccttgcttatgcttctacagaa
caaataagcatggaccttaagaatgaattaacataccagatggaacaagatcataattta
caaagtgtgttacaagagagagagttgctgcctgtgaagaaatttgaagctgaaattctg
gaagccattagttcaaattcagttgtgattatccgaggggctactggttgtggtaaaacc
acacaagttccacagtacattttggatgactttatccagaatgacagagcagccgaatgc
aatattgttgtgacacagcccagaaggatcagtgcagttgcagtggcagagcgagttgct
tatgagagaggagaagagcctggaaaaagctgtggttacagtgttcgatttgagtctata
cttccacgccctcatgccagtataatgttttgtactgtaggtgtgcttctaagaaaacta
gaagccggcattcgaggaatcagtcatgttattgtggatgaaattcatgaaagagatatt
aatactgacttccttttggtagtactgcgtgatgtggttttggcttatcctgaagtccgt
attgttcttatgtctgcaactattgataccaccatgttctgtgaatatttcttcaattgc
cccatcattgaggtttatggaaggactttcccagttcaagagtattttctggaagactgc
attcagatgactcaattcattcctcctccaaaggacaagaaaaagaaggataaggaggat
gatggtggtgaagatgatgatgcaaattgcaacctaatatgtggtgacgaatatgggcca
gaaacaaagttgagcatgtctcagttgaatgaaaaggaaactccttttgaacttattgag
gcgcttcttaaatacattgaaacccttaatgttcctggagctgtgttggtatttttacct
ggctggaacttgatttatactatgcaaaagcatttagaaaataattcgcatttcggaagt
caccggtatcagattctacctctccattctcagattcctcgtgaggaacagcgcaaagtg
tttgatccagtaccagatggagtaaccaaggttattttgtccacaaacattgctgaaaca
agcattaccataaatgatgttgtttacgtcattgactcctgcaaacaaaaagtgaaacta
tttactgctcacaacaatatgaccaactatgctactgtatgggcatcaaaaacaaacctt
gagcagaggaaagggcgagctggccgtgtacgacctgggttctgtttccacctttgtagt
cgagctcgttttgacagactagagacccacatgacaccagagatgtttagaacaccattg
catgaaattgctctgagcataaaacttctgcgtctaggaggaattggccaattccttgca
aaggcaatcgaacctccacctttggatgctgtaattgaagcagagcatactctaagagaa
cttgatgctttagatgccaatgatgagttgactcctcttggacgaatcctggctaaactc
cccattgaacctcgttttggaaaaatgatgataatggggtgtattttctatgtgggagat
gctgtctgtaccatctctgctgctacctgcttcccagaaccctttatcagcgaaggaaaa
cgcctgggatacatacaccggaattttgctggaaacagattttctgatcacgtggctctt
ttatcagtattccaagcctgggatgatgctaggatgagtggagaagaagcagaaatacgt
ttttgtgagcagaagagactcaatatggctacactgagaatgacttgggaggccaaagta
cagcttaaagagattctgattaactctggatttcccgaagattgtttattgacacaagtg
tttactaacactggaccagataataatttggatgttgttatctctctgctggcttttggt
gtgtaccccaatgtatgctatcataaggagaagagaaagattcttaccactgaagggcgc
aatgcacttatccacaagtcatctgtgaactgtcctttcagcagccaagacatgaagtac
ccatctcctttctttgtttttggtgaaaagattagaacccgagccatctctgctaaaggc
atgaccttagtgacccccttacagctacttctctttgcctccaagaaagtccagtcggat
gggcagattgtgtttatagatgactggatcagactgcaaatatctcatgaagctgcagca
tgcatcacagccctccgggcagccatggaagctctggttgttgaagtgtccaaacaacca
aatattatcagccaattggaccctgtaaatgaacatatgctaaacacaatccgacagatt
tctaggccctcagctgctggtatcaaccttatgattggaagtgtaaggtacggcgatggt
ccacgacctcccaagatggcccgatatgataatggaagtggatatagaaggggatatggt
gggggaggatatggtggcggaggatatggtggcggatacggtagtggaggctttggagga
ggctttggaagtgggggaggctttggaggaggctttaacagcggtgggggaggctttggt
agtggtgggggaggctttggcagtggtggaggtggatttggtggtggtggaggaggcttc
agtggtggaggaggtggtggatttggtggtggcagaggaggtggaggtggcggatttggg
ggtagtgggggctttggaagtggtgggggagggtatggtgttggaggtggtggctatgga
ggaggtggtggtggtggctatggaggaggcagtggaggatatggaggtgggggagggggt
tatggtggtggggaaggttatagtataagccccaactcttaccgtgggaattatggtggt
ggcgggggagggtatagaggaggttcccaaggaggctacagaaacaactttggtggagac
tacagagggtccagtggagactaccggggatccggtgggggctatagaggatctggagga
ttccagcgaaggggttatggaggtggttattttggacaaggaagaggaggagggggtggt
ggtggctattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (8)   
   UniProt (4)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (37)   
   RefSeq(nuc) (5)   
   GenBank (16)   
   EMBL (16)   
3D Structure (4)   
   PDB (4)   
Protein domain (13)   
   Pfam (13)   
All databases (93)   

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