KEGG   Mus musculus (house mouse): 13716
Entry
13716             CDS       T01002                                 
Symbol
Ell, Ell1, Men
Name
(RefSeq) elongation factor RNA polymerase II
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    13716 (Ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mmu01009]
    13716 (Ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    13716 (Ell)
Protein phosphatases and associated proteins [BR:mmu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     13716 (Ell)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     13716 (Ell)
    Little elongation complex (LEC)
     13716 (Ell)
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3450 Taxilin DUF6185 GAS Sec20 SPATS2-like
Other DBs
NCBI-GeneID: 13716
NCBI-ProteinID: NP_031950
MGI: 109377
Ensembl: ENSMUSG00000070002
UniProt: O08856
Position
8:70992345..71045508
AA seq 602 aa
MAALKEARSYGLSCGRVSDGSRVSVFHVKLTDSALKAFESYRAHQDSVSLRPSIRFEGSQ
GHISIPQPDCPEEVRAFSFYLSNIGRDSPQGSFDCIQQYVSSYGDVHLDCLGSIQDKVTV
CATDDSYQKARQSMAQAEEETRSRSAIVIKAGGRYMGKKVQFRKPAPGAADAVPSRKRAT
PINLASAIRKSSGSGASSVVQRPFRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDTLD
SLLQQVASVNPKDGTCTLQDCMYKSLQKDWPGYSEGDRQLLKRMLMRKLCQPQNATTDSS
PPREHGRSASPSQKRPTDFIDPLASKKPRISHFTQRAQPTLNGKLGAPNGHETLLPAPGP
TPSDTLSSSHLPPRLEPPRTHDPLADVSNDLGHSTQDYKHQEATPAPAPHLGLPLLTDFP
QAEQPTSSSHTHSRPKKKSKKHKDKERPPEERPPAPQPDAPTAPALPPDAPGLNGACDNE
PTSSSETPDYLLKYPAISSSEQRQSYKNDFNAEYSEYRSLHARIEQITRRFTQLDAQLRQ
LSQGSDEYETTRGQILQEYRKIKKTNTNYSCEKRRCEYLHRKLAHIKRLIAEYDQRQLQA
WP
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggctaggagttacgggttgtcgtgtgggcgcgtgagcgacggc
agcagggtgtcggtgttccacgtgaagctcaccgacagtgctttgaaggcttttgaaagc
taccgggcccaccaggattctgtgtcactgagaccttccatccgatttgaaggaagccaa
gggcacatctctataccccagcctgactgcccagaggaggtgcgggccttctccttctac
ctctccaatattggccgcgacagccctcagggcagctttgattgcatccaacaatatgta
tccagctatggggatgtacacctggactgcctgggcagcatccaggacaaggtcacggtg
tgtgctactgatgactcctaccagaaagcacgacagagcatggcacaggcagaggaggag
actcggagccgaagtgccatcgtcattaaggctggaggccgatacatggggaaaaaggtt
cagtttcggaagccagcgccaggggcagctgatgcagtaccctcccggaagcgtgctacc
cccattaacctggcaagtgccatcagaaagagcagtgggagtggagccagcagtgtggta
cagaggcccttccgagatcgggtgctacacctcctggccctgaggccctacaggaaggct
gagctgctgctgcggttgcagaaggatgggttgacacaggcagacaaggacaccctggac
agcctgctgcagcaggtggccagtgtgaaccccaaggatggcacgtgcacgctgcaggac
tgcatgtacaaaagcctgcagaaggactggcccggctactctgagggggaccggcagctg
ctgaagcgcatgctcatgcggaagctgtgtcagccacagaatgccactacagactccagc
ccgccccgagagcatggacgctctgcctcaccctctcagaaacggcctacagacttcatt
gaccccctggccagcaagaagccccggatctcacatttcacacagcgagcacaacccacc
ctcaatggcaaactgggtgcccccaatggccatgagacactgctgcctgctccaggaccc
accccatcagacaccctcagctctagccatctgcccccacggctggagcccccaaggacc
cacgaccccctagctgatgtcagtaatgacctaggtcacagtacccaggactacaagcac
caggaagccaccccagctccagcaccccatcttggtcttcccctgctgacggactttcct
caggctgagcaacctactagctcctcacacacccacagccgacccaagaagaagtccaag
aagcacaaagacaaggagcggccccctgaagaaaggccccccgccccacagcctgatgca
cctactgcccctgcactaccgccagatgccccaggtctgaatggagcctgtgacaatgaa
cccacatcctcgtcagagaccccggactatttgctgaaatacccagccatctcgtcgtca
gagcagcgtcagagctacaagaatgacttcaatgctgagtacagcgagtaccgcagtctg
cacgcgcggatcgagcagatcacccgcaggttcacccagcttgacgcacagctcagacag
ctgagccagggctctgatgagtacgagacaacccgtgggcaaattcttcaggaatacagg
aaaatcaaaaagaccaacaccaactacagctgtgagaagcgacgctgcgaatacctgcac
cgcaagctggcgcacattaagaggctcatcgcagagtatgaccagcggcagcttcaggcc
tggccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
Protein domain (8)   
   Pfam (8)   
All databases (74)   

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