KEGG   Mus musculus (house mouse): 13872
Entry
13872             CDS       T01002                                 
Symbol
Ercc3, BTF2_p89, Ercc-3, XPB
Name
(RefSeq) excision repair cross-complementing rodent repair deficiency, complementation group 3
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03022  Basal transcription factors
mmu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    13872 (Ercc3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    13872 (Ercc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    13872 (Ercc3)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    13872 (Ercc3)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     13872 (Ercc3)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     13872 (Ercc3)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     13872 (Ercc3)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_34
Other DBs
NCBI-GeneID: 13872
NCBI-ProteinID: NP_598419
MGI: 95414
Ensembl: ENSMUSG00000024382
UniProt: P49135
Position
18:32373357..32403206
AA seq 783 aa
MGKRDRVDRDKKKSKKRQYEEEEEDEDDIPGNESQEAVPSAAGKQVDESSTKVDEYGAKD
YRQQMPLKGDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNAEGEATELITETFTSKSAISKTAAEGSGGPSTSQGVDAQ
ATSDIPKDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCICLEYPLLAEYDFRN
DTLNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRK
RCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKR
SWEAERVMEWLKTQEWGLMILDEVHTIPARMFRRVLTIVQAHCKLGLTATLVREDDKIVD
LNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPN
KFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHN
PKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFF
YSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELAFSTKEEQQQLLQKVLAA
TDLDAEEEVVAGEFGSRSGQASRRCGTMSSLSGADDTVYMEYHSSRSKASSKHVHPLFKR
FRK
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgggcaaaagagatcgagtggaccgcgacaaaaagaaatccaagaagaggcagtatgaa
gaggaagaggaagacgaagacgacattcctgggaacgagtctcaggaggcggtgccctcc
gccgctgggaaacaggtggacgagtccagcaccaaagtggatgagtatggagcaaaggac
tacagacagcagatgccactaaagggtgaccatacctccaggcccctctgggtggctcct
gatggccacattttcttggaagccttctctccagtttacaaatatgcccaagacttcctg
gtggcaattgcagagccggtgtgccggcctactcatgtacatgaatacaagctaaccgcc
tactccctctatgcagcggtcagtgttgggctgcaaaccagtgacattactgagtacctc
agaaagctcagtaagactggagttcctgatggaattatccagtttattaagctgtgcact
gtcagctatgggaaggtcaagctggtcctcaagcacaacaggtactttgttgaaagttcc
caccctgatgttatccagcatcttcttcaagacccagtgatccgggaatgtcgcttgagg
aacgccgagggcgaggccaccgaactcatcacagagacttttacaagcaaatctgctatt
tctaagacggcggcggaaggcagtggcgggccttctacttcgcagggggtagatgcacag
gccacgtctgacatacccaaagacctgtttgatttttatgagcaaatggacaaggatgag
gaggaggaggaagagacacagacagtgtcctttgaagttaagcaggaaatgatcgaggag
ctgcagaagcgctgcatctgcttagagtacccgctgctggcagagtatgacttccggaat
gacactctcaatcctgacatcaacattgacctgaagcccacagccgtactcagaccctat
caggagaagagcctgcggaagatgtttgggaacggacgagcacgctcaggagtcattgtt
cttccctgtggtgctgggaagtccctggtcggcgtgactgccgcatgcactgtcagaaag
cgctgtctcgtcctgggcaactcggctgtgtctgtggagcagtggaaagcccagtttaag
atgtggtcaaccatcgatgacagccagatctgccgcttcacctcagatgccaaggacaag
cccatcggctgctccgttgccattagcacttactctatgctgggccacaccaccaaaagg
tcctgggaagctgagagagtcatggagtggctcaaaacccaggagtggggcctcatgatc
cttgacgaggtgcacaccattccagccaggatgttccggcgggttctgactattgtgcag
gcgcactgtaagcttggtttgactgcaacccttgtccgggaagatgacaaaattgttgac
ttaaatttcctgattgggcccaagctctatgaagccaactggatggagctgcagaacaat
gggtacatcgctaaagtccagtgtgctgaggtttggtgcccgatgtctcccgagttctac
cgagagtatgtggcaatcaaaacaaagaaacggatcctgttgtacaccatgaatcccaac
aaattcagagcctgccagtttctgatcaagtttcatgaaaggaggaatgacaagattatt
gtctttgctgacaacgtatttgccttgaaggaatatgccattcggctgaacaaaccttat
atctacgggcccacgtcccagggagaacgtatgcagattctccagaacttcaagcacaac
cccaaaatcaacaccatcttcatctccaaggttggtgacacatcctttgatctgccagaa
gccaatgtcctcattcagatctcttcccatggtggctcccgacggcaggaagcccagaga
ctgggacgggtactcagagccaagaaagggatggtcgcagaggaatacaatgcctttttc
tactccctggtatctcaggacacacaggaaatggcttattctaccaagcgacagagattc
ctagtggatcaaggttacagctttaaggtaatcacaaagctagctggcatggaggaagag
gagctggcgttctccaccaaagaggagcagcagcagctcctgcagaaggtgctggcagcc
accgacttggatgcagaggaggaagtggtggctggagagtttggctctagatctggccag
gcatcccgacgctgtggcaccatgagctccctgtcaggcgcagacgacaccgtgtacatg
gagtaccactcctcccgaagcaaggcctccagcaagcacgtgcacccgcttttcaaacgc
ttcaggaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (25)   
   RefSeq(nuc) (3)   
   GenBank (11)   
   EMBL (11)   
Protein domain (8)   
   Pfam (8)   
All databases (59)   

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