KEGG   Mus musculus (house mouse): 140792
Entry
140792            CDS       T01002                                 
Symbol
Colec12, CL-P1, SRCL, Scara4
Name
(RefSeq) collectin sub-family member 12
  KO
K10062  collectin sub-family member 12
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04145  Phagosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    140792 (Colec12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    140792 (Colec12)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:mmu04091]
    140792 (Colec12)
Membrane trafficking [BR:mmu04131]
 Endocytosis
  Phagocytosis
   Opsonins
    140792 (Colec12)
Lectins [BR:mmu04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   Scavenger receptor with a CTLD (SRCL)
    140792 (Colec12)
SSDB
Motif
Pfam: Collagen Lectin_C Filament KxDL CFAP77 Alpha-2-MRAP_C Tropomyosin MscS_porin DUF6779
Other DBs
NCBI-GeneID: 140792
NCBI-ProteinID: NP_569716
MGI: 2152907
Ensembl: ENSMUSG00000036103
UniProt: Q8K4Q8
Structure
Position
18:9707648..9877995
AA seq 742 aa
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIVLLYILCALLTITVAILGYK
VVEKMDNVTDGMETSHQTYDNKLTAVESDLKKLGDQAGKKALSTNSELSTFRSDILDLRQ
QLQEITEKTSKNKDTLEKLQANGDSLVDRQSQLKETLQNNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQSQMYSQSVVIMNLNNLNLTQVQQRNLISNLQQSVDDTSLAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFTGQMDNI
TTISQANEQSLKDLQDLHKDTENRTAVKFSQLEERFQVFETDIVNIISNISYTAHHLRTL
TSNLNDVRTTCTDTLTRHTDDLTSLNNTLVNIRLDSISLRMQQDMMRSKLDTEVANLSVV
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGP
AGERGTIGPVGPPGERGSKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAMEPLALQNEPTP
ASEVNGCPPHWKNFTDKCYYFSLEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVG
RESHWIGLTDSEQESEWKWLDGSPVDYKNWKAGQPDNWGSGHGPGEDCAGLIYAGQWNDF
QCDEINNFICEKEREAVPSSIL
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgaaagacgactttgcagaggaagaggaggtgcagtccttcggttacaagaggtttggt
attcaggaggggacacagtgtaccaaatgtaaaaataactgggcactgaagttttcgatt
gtattattatacattctgtgtgccttactgaccatcacagtagccattttgggatataaa
gttgtagagaaaatggacaatgtcacagatggcatggagacatctcaccagacttatgac
aacaaactcactgctgtggaaagtgacctgaagaaattaggggatcaagctgggaagaaa
gctctaagtaccaactctgagctttctaccttcagatcagatattctggatctccgtcaa
caacttcaggagatcacagaaaaaaccagcaagaacaaagatacgctggagaagttgcaa
gcaaatggggactcattggttgataggcagagtcagctgaaggaaactctgcagaataat
tctttcctcattaccaccgtcaacaaaacactccaggcatataatggctatgtcacaaat
ctgcaacaagatactagtgtgctccagggcaatctgcagagccaaatgtattctcagagc
gtggttatcatgaacctcaacaacctgaacctaacccaggttcagcagaggaaccttatc
tcaaatctgcagcagtctgtggatgacacaagcctggccatccagcgaattaagaatgat
ttccaaaatctgcagcaggttttccttcaagccaagaaggacaccgattggctaaaggaa
aaagtacagagcttgcagacattggctgccaacaactctgccctggccaaagccaacaat
gacaccctagaggatatgaatagccagctcagctcattcacaggtcagatggacaacatt
accactatctcacaggccaacgagcagagcctgaaagaccttcaggacttacacaaggat
acagaaaatagaacagctgtcaagttcagccaacttgaggaacgcttccaggtctttgag
acagatattgtgaacatcattagcaacatcagctacacagcccatcacctgaggacactg
accagcaatctgaatgatgttaggaccacatgcacagacaccttgaccagacacacggat
gacctgacctccttgaataacacactagtcaacatccgcttggattctatttctctcagg
atgcagcaagacatgatgaggtcaaagttagacactgaagtggccaacttatcagtggtt
atggaagagatgaaactggttgactccaagcacggtcagctcatcaagaactttaccatt
ctacaaggtcctcctggccccagaggtccaaaaggtgacagaggatctcagggaccacct
ggtccaactggcaacaagggacagaaaggagagaagggagagcctggtccacctggccct
gcgggtgagaggggcacaattggaccagtcggccctcctggagagcgtggcagcaaagga
tccaaaggctcacagggtcccaaaggatctcgtgggtccccagggaagcctggccctcaa
ggacctagtggggacccaggaccaccaggtccaccaggcaaggatggactccctggccct
cagggccctcctggcttccagggactacagggcactgtgggtgagcctggagtacctgga
cctcgggggttgccaggcttgccaggggtgccaggcatgcctgggcctaagggaccacct
ggccctccaggcccctcaggagcaatggagccattggctctgcagaatgaaccaacccca
gcatcagaggtcaacggatgtccgcctcactggaagaacttcacagataaatgctactat
ttttcattggaaaaagaaatttttgaagatgctaagcttttctgtgaagacaaatcttcc
catctcgttttcataaactcaagagaagaacagcaatggataaaaaagcataccgtgggg
agagaaagccattggatcggcctcacagactcagaacaggaaagcgaatggaagtggcta
gacgggtcacctgttgattacaaaaactggaaagctggacaaccagataactggggcagt
ggccatgggccaggagaagactgtgctggcttgatttacgcaggacagtggaatgacttc
cagtgtgatgaaatcaataacttcatttgtgagaaggaaagggaggcagtaccatcatcc
atattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (20)   
   RefSeq(nuc) (2)   
   GenBank (9)   
   EMBL (9)   
3D Structure (1)   
   PDB (1)   
Protein domain (9)   
   Pfam (9)   
All databases (86)   

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