KEGG   Mus musculus (house mouse): 14394
Entry
14394             CDS       T01002                                 
Symbol
Gabra1, GABAA-alpha1, GABAAR-alpha1, Gabra-1
Name
(RefSeq) gamma-aminobutyric acid type A receptor subunit alpha 1
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04080  Neuroactive ligand-receptor interaction
mmu04723  Retrograde endocannabinoid signaling
mmu04727  GABAergic synapse
mmu04742  Taste transduction
mmu05032  Morphine addiction
mmu05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    14394 (Gabra1)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    14394 (Gabra1)
   04723 Retrograde endocannabinoid signaling
    14394 (Gabra1)
  09157 Sensory system
   04742 Taste transduction
    14394 (Gabra1)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    14394 (Gabra1)
   05033 Nicotine addiction
    14394 (Gabra1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    14394 (Gabra1)
Ion channels [BR:mmu04040]
 Ligand-gated channels
  GABA-A
   14394 (Gabra1)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Other DBs
NCBI-GeneID: 14394
NCBI-ProteinID: NP_034380
MGI: 95613
Ensembl: ENSMUSG00000010803
UniProt: P62812 Q544F7 Q3URD4
Structure
Position
11:complement(42021766..42073893)
AA seq 455 aa
MKKSRGLSDYLWAWTLILSTLSGRSYGQPSQDELKDNTTVFTRILDRLLDGYDNRLRPGL
GERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKI
WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
LKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMT
THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
IKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaagaaaagtcggggtctctctgactatctttgggcctggaccctcattctgagcaca
ctgtcgggaagaagctatggacagccctcccaagatgaacttaaagacaacaccactgtc
ttcacaagaattttggaccgactgctggacggttatgacaatcgtctgagaccaggtttg
ggagagcgtgtaactgaagtgaagaccgacattttcgtcaccagtttcggaccagtttca
gaccacgatatggagtatacaatagatgtgtttttccgtcaaagttggaaggatgaaaga
ttaaaattcaaaggacccatgacagtgctccggctaaacaaccttatggccagtaaaatc
tggactccagatacatttttccacaatggaaagaagtctgtggcccacaacatgaccatg
cctaataagctcctgcgtatcacagaggatggcactctgctgtacaccatgaggttgacc
gtgagagctgaatgcccaatgcacttggaagacttccctatggatgcccatgcctgccca
ctaaaattcggaagctatgcttatacaagagcagaagttgtctatgagtggaccagagag
ccagcccgttcagtggttgtagcagaagatgggtcacgtttaaaccagtatgaccttctt
ggacaaacagttgactctggaattgttcagtccagtactggagaatatgtggttatgacg
actcacttccacttgaagagaaaaattggctactttgttattcaaacatatctgccgtgc
ataatgacagttattctctcccaagtctccttctggctcaacagagagtcagtaccagca
agaactgtctttggagtgacgactgttctgactatgacaaccttgagtatcagtgccaga
aattccctcccgaaggtggcttatgcaacagctatggactggtttattgcagtatgctat
gcctttgttttctcagctctgattgagtttgccacagtaaactatttcaccaagagaggg
tatgcgtgggatggcaaaagcgtggttccagaaaagccaaagaaagtaaaggatcctctc
attaagaaaaacaacacatatgctcctacagcaaccagctatacccctaacttagccagg
ggtgaccccggcttggcaactattgctaaaagtgcgaccatagaaccgaaagaagtcaag
cctgagacaaaaccaccagaacccaagaaaacctttaacagcgtcagcaaaatcgaccga
ctgtcaagaatagcctttccgctgctatttggaatctttaacttagtctattgggccacg
tatttaaacagagagcctcagctaaaagcccccacaccccatcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (24)   
   RefSeq(nuc) (4)   
   GenBank (10)   
   EMBL (10)   
3D Structure (10)   
   PDB (10)   
Protein domain (2)   
   Pfam (2)   
All databases (65)   

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