KEGG   Mus musculus (house mouse): 15165
Entry
15165             CDS       T01002                                 
Symbol
Hcn1, Bcng1, C630013B14Rik, HAC2
Name
(RefSeq) hyperpolarization activated cyclic nucleotide gated potassium channel 1
  KO
K04954  hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04929  GnRH secretion
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    15165 (Hcn1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    15165 (Hcn1)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   15165 (Hcn1)
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding TFIIA PAT1 Ion_trans_2 DDHD Hamartin YABBY Peptidase_S49_N DUF2828
Other DBs
NCBI-GeneID: 15165
NCBI-ProteinID: NP_034538
MGI: 1096392
Ensembl: ENSMUSG00000021730
UniProt: O88704
Structure
Position
13:117738856..118117564
AA seq 910 aa
MEGGGKPNSASNSRDDGNSVFPSKAPATGPVAADKRLGTPPGGGAAGKEHGNSVCFKVDG
GGGEEPAGSFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAG
FWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVFLLDLI
MNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTA
RALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHW
DGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAPVSMSD
LWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKI
HDYYEHRYQGKIFDEENILSELNDPLREEIVNFNCRKLVATMPLFANADPNFVTAMLSKL
RFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTKGRRTA
SVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNT
GVFNNQENEILKQIVKHDREMVQAIPPINYPQMTALNCTSSTTTPTSRMRTQSPPVYTAT
SLSHSNLHSPSPSTQTPQPSAILSPCSYTTAVCSPPIQSPLATRTFHYASPTASQLSLMQ
QPQQQLPQSQVQQTQTQTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQTPG
SSTPKNEVHKSTQALHNTNLTKEVRPLSASQPSLPHEVSTLISRPHPTVGESLASIPQPV
AAVHSTGLQAGSRSTVPQRVTLFRQMSSGAIPPNRGVPPAPPPPAAVQRESPSVLNTDPD
AEKPRFASNL
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggaaggcggcggcaaacccaactccgcgtccaacagccgcgacgatggcaacagcgtc
ttcccctccaaggcgcccgcgacggggccggtggcggccgacaagcgcctggggaccccg
ccggggggcggcgcggccgggaaggaacatggcaactccgtgtgcttcaaggtggacggc
ggcggaggagaggagccggcgggcagcttcgaggatgccgaggggccccggcggcagtat
ggtttcatgcagaggcagttcacctccatgctgcagcctggggtcaacaaattctccctc
cgcatgtttgggagccagaaggcggtggagaaggagcaggaaagggttaaaactgcaggc
ttctggattatccatccgtacagtgacttcaggttttattgggatttaatcatgcttata
atgatggttggaaatttggtcatcataccagttggaatcacgttcttcacagagcagacg
acaacaccgtggattattttcaacgtggcatccgatactgttttcctgttggacttaatc
atgaattttaggactgggactgtcaatgaagacagctcggaaatcatcctggaccctaaa
gtgatcaagatgaattatttaaaaagctggtttgtggtggacttcatctcatcgatcccg
gtggattatatctttctcattgtagagaaagggatggactcagaagtttacaagacagcc
agagcacttcgtatcgtgaggtttacaaaaattctcagtctcttgcggttattacgcctt
tcaaggttaatcagatacatacaccagtgggaagagatattccacatgacctatgacctc
gccagtgctgtggtgaggatcttcaacctcattggcatgatgctgcttctgtgccactgg
gatggctgtcttcagttcctggttcccctgctgcaggacttcccaccagattgctgggtt
tctctgaatgaaatggttaatgattcctggggaaaacaatattcctacgcactcttcaaa
gctatgagtcacatgctgtgcattggttatggcgcccaagcccctgtcagcatgtctgac
ctctggattaccatgctgagcatgattgtgggcgccacctgctacgcaatgtttgttggc
catgccacagctttgatccagtctttggactcttcaaggaggcagtatcaagagaagtat
aagcaagtagagcaatacatgtcattccacaagttaccagctgacatgcgccagaagata
catgattactatgagcaccgataccaaggcaagatcttcgatgaagaaaatattctcagt
gagcttaatgatcctctgagagaggaaatagtcaacttcaactgccggaaactggtggca
actatgcctctttttgctaacgccgatcccaatttcgtgacggccatgctgagcaagctg
agatttgaggtgttccagcccggagactatatcattcgagaaggagctgtggggaagaaa
atgtatttcatccagcacggtgttgctggcgttatcaccaagtccagtaaagaaatgaag
ctgacagatggctcttacttcggagagatatgcctgctgaccaagggccggcgcactgcc
agtgtccgagctgatacctactgtcgtctttactccctttcggtggacaatttcaatgag
gtcttggaggaatatccaatgatgagaagagcctttgagacagttgctattgaccgactc
gatcggataggcaagaaaaactctattctcctgcagaagttccagaaggatctaaacact
ggtgttttcaacaaccaggagaacgagatcctgaagcagatcgtgaagcatgaccgagag
atggtacaagctatccctccaatcaactatcctcaaatgacagccctcaactgcacatct
tcaaccaccaccccaacctcccgcatgaggacccaatctccgccagtctacaccgcaacc
agcctgtctcacagcaatctgcactcacccagtcccagcacacagacgccccaaccctca
gccatcctttcaccctgctcctataccacagcagtctgcagtcctcctatacagagcccc
ctggccacacgaactttccattatgcctctcccactgcgtcccagctgtcactcatgcag
cagcctcagcagcaactaccgcagtcccaggtacagcagactcagactcagactcagcag
cagcagcagcaacagcagcagcagcagcagcagcaacagcaacaacagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagccacagacacctggt
agctccacaccgaaaaatgaagtgcacaagagcacacaagcccttcataacaccaacctg
accaaagaagtcaggcccctttccgcctcgcagccttctctgccccatgaggtctccact
ttgatctccagacctcatcccactgtgggcgaatccctggcctctatccctcaacccgtg
gcagcagtccacagcactggccttcaggcagggagcaggagcacagtgccacaacgtgtc
accttgttccgacagatgtcctcgggagccatcccccccaaccgaggagtgcctccagca
ccccctccaccagcagctgtgcagagagagtctccctcagtcctaaatacagacccagat
gcagaaaaaccccgttttgcttcgaatttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
3D Structure (1)   
   PDB (1)   
Protein domain (11)   
   Pfam (11)   
All databases (53)   

Download RDF
DBGET integrated database retrieval system