KEGG   Mus musculus (house mouse): 16873
Entry
16873             CDS       T01002                                 
Symbol
Lhx5, Lim2
Name
(RefSeq) LIM homeobox protein 5
  KO
K18493  LIM homeobox protein 5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    16873 (Lhx5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    16873 (Lhx5)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    16873 (Lhx5)
SSDB
Motif
Pfam: LIM Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 16873
NCBI-ProteinID: NP_032525
MGI: 107792
Ensembl: ENSMUSG00000029595
UniProt: P61375 Q543P4
Position
5:120569951..120579522
AA seq 402 aa
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgatggtgcactgtgctggctgtgagcggcccatcctcgaccgctttctgctgaacgta
ctagaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctctcg
gagaagtgcttctcacgggaaggcaagctatactgtaaaaacgactttttcaggcgcttt
ggcacaaagtgcgccggctgcgcgcaaggtatctctccgagcgacctggtacggaaggcc
cggagcaaagtcttccacctcaactgcttcacctgtatggtgtgcaataagcagctatcc
accggagaggagctctacgtgatcgacgagaacaagtttgtgtgcaaggacgactactta
agctcctctagcctcaaggaaggaagtctcaactcggtgtcgtcctgtacggaccgcagt
ttgtccccggacctccaggatccgttacaggacgaccccaaagagaccgacaattcgacc
tcatcggacaaggaaaccgctaacaacgagaatgaggaacagaactccggcaccaaacgg
cgcggcccgcgcaccaccatcaaggccaagcagctggagacgctcaaggcagccttcgca
gccacgcccaagcccacgcgccacattcgcgaacagctggcacaggagacgggcctcaac
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgccgcatgaaacag
ctgagcgctctgggcgcgcggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccatacacttattacgga
gactaccaaagtgactactacgctccgggaggcaattacgatttcttcgcgcacggtccg
ccgtcacaggcgcagtcccctgccgactccagcttcctggcagcatcgggacctggctcg
acgccgctgggcgcgctggaaccgccgctggccgggcctcacggcgcggacaaccccaga
ttcaccgacatgatctcgcatccggacacgccgagccccgagccgggcctgcccggtgcg
ctgcaccccatgccgggagaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcaccagcggctacagtggacccctgtcgcaccccaaccctgagctcaacgaagcggcc
gtatggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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