KEGG   Mus musculus (house mouse): 16992
Entry
16992             CDS       T01002                                 
Symbol
Lta, LT, LT-[a], LT-alpha, LT[a], LTalpha, Ltx, TNF-beta, TNFSF1, Tnfb, Tnfsf1b, Tnlg1e, hlb382
Name
(RefSeq) lymphotoxin A
  KO
K05468  lymphotoxin alpha (TNF superfamily, member 1)
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04060  Cytokine-cytokine receptor interaction
mmu04061  Viral protein interaction with cytokine and cytokine receptor
mmu04064  NF-kappa B signaling pathway
mmu04668  TNF signaling pathway
mmu04940  Type I diabetes mellitus
mmu05166  Human T-cell leukemia virus 1 infection
mmu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    16992 (Lta)
   04668 TNF signaling pathway
    16992 (Lta)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    16992 (Lta)
   04061 Viral protein interaction with cytokine and cytokine receptor
    16992 (Lta)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    16992 (Lta)
   05168 Herpes simplex virus 1 infection
    16992 (Lta)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    16992 (Lta)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mmu04052]
    16992 (Lta)
Cytokines and neuropeptides [BR:mmu04052]
 Cytokines
  Tumor necrosis fators
   16992 (Lta)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 16992
NCBI-ProteinID: NP_034865
MGI: 104797
Ensembl: ENSMUSG00000024402
UniProt: P09225 Q542S2
Position
17:complement(35422141..35424568)
AA seq 202 aa
MTLLGRLHLLRVLGTPPVFLLGLLLALPLGAQGLSGVRFSAARTAHPLPQKHLTHGILKP
AAHLVGYPSKQNSLLWRASTDRAFLRHGFSLSNNSLLIPTSGLYFVYSQVVFSGESCSPR
AIPTPIYLAHEVQLFSSQYPFHVPLLSAQKSVYPGLQGPWVRSMYQGAVFLLSKGDQLST
HTDGISHLHFSPSSVFFGAFAL
NT seq 609 nt   +upstreamnt  +downstreamnt
atgacactgctcggccgtctccacctcttgagggtgcttggcacccctcctgtcttcctc
ctggggctgctgctggccctgcctctaggggcccagggactctctggtgtccgcttctcc
gctgccaggacagcccatccactccctcagaagcacttgacccatggcatcctgaaacct
gctgctcaccttgttgggtaccccagcaagcagaactcactgctctggagagcaagcacg
gatcgtgcctttctccgacatggcttctctttgagcaacaactccctcctgatccccacc
agtggcctctactttgtctactcccaggtggttttctctggagaaagctgctcccccagg
gccattcccactcccatctacctggcacacgaggtccagctcttttcctcccaatacccc
ttccatgtgcctctcctcagtgcgcagaagtctgtgtatccgggacttcaaggaccgtgg
gtgcgctcaatgtaccagggggctgtgttcctgctcagtaagggagaccagctgtccacc
cacaccgacggcatctcccatctacacttcagccccagcagtgtattctttggagccttt
gcactgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

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