KEGG   Mus musculus (house mouse): 17386
Entry
17386             CDS       T01002                                 
Symbol
Mmp13, Clg, MMP-13, Mmp1
Name
(RefSeq) matrix metallopeptidase 13
  KO
K07994  matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04657  IL-17 signaling pathway
mmu04926  Relaxin signaling pathway
mmu04928  Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    17386 (Mmp13)
  09152 Endocrine system
   04926 Relaxin signaling pathway
    17386 (Mmp13)
   04928 Parathyroid hormone synthesis, secretion and action
    17386 (Mmp13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mmu01002]
    17386 (Mmp13)
Peptidases and inhibitors [BR:mmu01002]
 Metallo peptidases
  Family M10
   17386 (Mmp13)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_4 Reprolysin_5 DUF4953
Other DBs
NCBI-GeneID: 17386
NCBI-ProteinID: NP_032633
MGI: 1340026
Ensembl: ENSMUSG00000050578
UniProt: P33435 Q3U9V5
Structure
Position
9:7272514..7283333
AA seq 472 aa
MHSAILATFFLLSWTPCWSLPLPYGDDDDDDLSEEDLVFAEHYLKSYYHPATLAGILKKS
TVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGVPDVGEYNVFPRTLKWSQTNLT
YRIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFD
GPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFIVAAHELGHSLGLDHSKDPGAL
MFPIYTYTGKSHFMLPDDDVQGIQFLYGPGDEDPNPKHPKTPEKCDPALSLDAITSLRGE
TMIFKDRFFWRLHPQQVEAELFLTKSFWPELPNHVDAAYEHPSRDLMFIFRGRKFWALNG
YDILEGYPRKISDLGFPKEVKRLSAAVHFENTGKTLFFSENHVWSYDDVNQTMDKDYPRL
IEEEFPGIGNKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSILWC
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgcattcagctatcctggccaccttcttcttgttgagctggactccctgttggtccctg
ccccttccctatggtgatgatgatgatgatgacctgtctgaggaagaccttgtgtttgca
gagcactacttgaaatcatactaccatcctgcgactcttgcgggaatcctgaagaagtct
acagtgacctccacagttgacaggctccgagaaatgcaatctttctttggcttagaggtg
actggcaaacttgatgatcccaccttagacatcatgagaaaaccaagatgtggagtgcct
gatgtgggtgaatacaatgttttccctagaacactcaaatggtcccaaacgaacttaact
tacaggattgtgaactatactcctgatatgtcccattctgaagtggagaaggccttcaga
aaagccttcaaggtctggtctgatgtgacaccactgaatttcaccagaatctatgatggc
actgctgacatcatgatatcttttgggactaaagaacatggtgacttctacccatttgat
ggaccttctggtcttctggcacacgcttttcctcctggaccaaactatggtggggatgcc
cattttgatgatgatgaaacctggacaagcagttccaaaggctacaacttgtttattgtt
gctgcccatgagcttggccactccctaggtctggatcactccaaggacccaggagccctg
atgtttcccatctatacctacactggcaaaagccatttcatgcttcctgatgatgacgtt
caaggaattcagtttctttatggtccaggcgatgaagaccccaaccctaagcatcccaaa
acaccagagaagtgtgacccagccctatcccttgatgccattaccagtctccgaggagaa
actatgatctttaaagacagattcttctggcgcctgcaccctcagcaggttgaggctgag
ctctttttgacaaagtccttttggccagaacttcccaaccatgtggatgctgcatatgaa
catccatcccgtgaccttatgtttatctttagagggagaaaattctgggctctgaatggt
tatgacattctggaaggttatcccagaaaaatatctgacctgggattcccaaaagaggtg
aagagactgagcgctgcggttcactttgagaacacggggaagaccctcttcttctctgag
aaccacgtgtggagttatgatgatgttaaccagactatggacaaagattatccccgcctc
atagaagaggaattccctggaattggcaacaaagtagatgctgtctatgagaaaaatggc
tatatctactttttcaatgggcccatacagtttgaatacagtatctggagtaatcgcatt
gtgagagtcatgccaacaaattccatattgtggtgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
3D Structure (1)   
   PDB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (62)   

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