KEGG   Mus musculus (house mouse): 17688
Entry
17688             CDS       T01002                                 
Symbol
Msh6, GTBP, Gtmbp
Name
(RefSeq) mutS homolog 6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu01524  Platinum drug resistance
mmu03430  Mismatch repair
mmu05200  Pathways in cancer
mmu05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    17688 (Msh6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    17688 (Msh6)
  09162 Cancer: specific types
   05210 Colorectal cancer
    17688 (Msh6)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    17688 (Msh6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    17688 (Msh6)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     17688 (Msh6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP
Other DBs
NCBI-GeneID: 17688
NCBI-ProteinID: NP_034960
MGI: 1343961
Ensembl: ENSMUSG00000005370
UniProt: P54276
Position
17:88282478..88298320
AA seq 1358 aa
MSRQSTLYSFFPKSPALGDTKKAAAEASRQGAAASGASASRGGDAAWSEAEPGSRSAAVS
ASSPEAKDLNGGLRRASSSAQAVPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
RKKGKSVRVHVQFFDDSPTRGWVSKRMLKPYTGSKSKEAQKGGHFYSSKSEILRAMQRAD
EALSKDTAERLQLAVCDEPSEPEEEEETEVHEAYLSDKSEEDNYNESEEEAQPSVQGPRR
SSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDSDSEDLGTFGKGAPKR
KRAMVAQGGLRRKSLKKETGSAKRATPILSETKSTLSAFSAPQNSESQTHVSGGGNDSSG
PTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNF
DLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTYSVLDGDPSENYSRYLLS
LKEKEEETSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNL
STETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLPLVLKGMT
SESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPG
AVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLC
SPSAISDRLDAVEDLMAVPDKVTEVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAI
MYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFP
DLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLG
CKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEE
RRDTSLKDCMRRLFCNFDKNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPG
EDTHPFLEFKGSRHPCITKTFFGDDFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKST
LIRQAGLLAVMAQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILR
HATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKSVCV
RLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKARE
FERMNQSLQLFREVCLATEKPTINGEAIHRLLALINGL
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgtcccgacaaagcaccttgtacagcttcttccccaagtccccggcactcggcgacacc
aagaaggccgcggccgaggcctcacgccaaggtgccgctgcctctggagcctccgcttcc
cgcggcggggatgcggcctggagcgaggctgaacccgggtcccggtccgcggcggtatcc
gcctcgtcgccggaggcaaaggatctcaacggagggctgcggagggcctcctcctccgcg
caggccgtgcctcccagttcttgtgacttctcaccaggtgatttggtttgggctaagatg
gaaggttacccctggtggccttgcctagtttataatcatccctttgatggaacgttcatc
cggaagaaagggaaatctgtccgtgttcatgtacagttctttgatgacagcccaacaagg
ggctgggttagcaaaaggatgttaaagccatatacaggttcaaagtcaaaggaagcccaa
aagggaggtcatttctacagttcaaagtctgagatactcagagcaatgcaacgtgcagat
gaggccttaagtaaagacacggctgagaggctgcagctggcagtgtgtgatgagccttca
gagccggaggaggaggaggagacagaggtgcatgaggcttatttatctgataagagtgaa
gaggataattacaacgagagtgaagaagaagcacagcccagtgttcaggggcctaggcga
agcagccggcaagtcaagaagcgacgggtcatctcagactcggagagtgacattggtggc
tctgatgtagaattcaagccagacactaagcaggaaggaagcagtgatgacgcgagcagt
ggagttggggacagcgatagtgaggacctaggcacctttggcaaaggcgctccaaagcgg
aagagagccatggttgctcagggtggacttagaaggaaaagtctgaagaaggaaacaggc
tcagccaaacgagcaactcccattctctcagaaaccaagagtaccttgagcgctttttct
gcccctcagaattctgaatcccagacccacgtcagtggaggaggtaacgacagtagtgga
cccactgtttggtatcacgaaactttagaatggcttaagccagaaaagagaagagatgag
cacaggagacgccccgatcaccctgaatttaaccccaccacactgtatgtgcctgaagag
ttcctcaattcttgtaccccagggatgaggaagtggtggcagctcaagtctcagaacttt
gacctcgtcatcttttataaggtggggaagttttatgagttgtatcacatggatgctgtt
attggagtcagtgagctggggctgatattcatgaagggcaactgggcccattctggtttt
ccagagattgcgtttggccggttctcggattccttggtgcagaagggctataaggtagca
cgagtggagcagaccgagactccagaaatgatggaggcgcgatgtcggaaaatggcacac
gtgtccaagtttgatagagtggtgagaagggagatttgcaggatcattaccaagggcaca
cagacctacagtgtgctggatggtgatccctctgagaactacagtaggtatcttcttagc
ctcaaagagaaggaggaagagacttctggtcacactcgtgtgtatggtgtttgctttgtg
gacacttcactgggcaagtttttcatcggccagttttcggatgaccgccactgttccaga
tttaggacgctagtggctcactatcctccagtacaaattttgttcgagaaaggaaatctc
tcaacagagaccaaaactgtcctaaagggttcactgtcatcttgtcttcaggaaggtctc
ataccaggttcccaattttgggatgccactaagaccttgcgaacactccttgaaggaggg
tactttactggaaatggagacagtagtacagtgctgcctctggtgcttaaaggaatgacc
tcggagtcagattctgttgggttgacaccaggcgaggagagtgaattggctctctctgct
ctaggtggtattgttttctacctcaaaaaatgcctgattgatcaggagcttctgtcaatg
gctaattttgaagagtatttccctttggattctgacacggtcagcacagtaaaacctggg
gctgtctttactaaagccagtcagcggatggtgctagacgcagtgacattaaacaacctg
gagattttcctgaatgggacaaatggctctactgaagggaccctgctagagagattggat
acttgccatacgccctttggcaagcggctcttaaaacagtggctctgtgcccccctctgc
agcccttctgccatcagtgaccgtctagatgcggtggaagatctgatggccgtgcctgac
aaggtcactgaagttgcagacctcttaaagaagctgccagaccttgagaggctactgagt
aagattcataatgttgggtctcccctgaagagccagaaccatccagacagcagggctata
atgtacgaagaaacgacatacagcaaaaagaagatcattgattttctctctgctctagaa
ggattcaaagtaatgtgtaaagtctcagggcttctggaggaggtcgcgggtggttttacg
tccaaaaccctcaagcaggttgttactctgcagtcaaaaagtcctaaaggccgctttcct
gacctgactgcagaactgcagcgatgggacacagcctttgaccatgagaaggctcggaag
accggactcatcactccaaaagcagggtttgactctgattatgaccaagcacttgctgac
atcagagagaatgaacagagcctcctggagtacttagacaaacagcgcagtcggcttggc
tgtaagagcatagtctactggggaatcggtaggaaccgttaccagttagagattccagag
aatttcgctacccgtaatctacctgaagaatatgagctgaaatctactaaaaaaggctgt
aaacgatactggaccaaaacgattgagaagaaattagctaatcttattaatgctgaagaa
cgcagggacacatccttaaaggactgcatgcggcgcttgttctgtaacttcgacaagaac
cacaaggactggcagtctgctgtagagtgcattgcagtgttggatgtcttactgtgcctg
gctaactacagtcaaggaggagatggtcctatgtgtcgcccagaaattgtgttaccagga
gaagacacacatcccttcttagagtttaaagggtcacgacatccctgcattacaaagact
ttttttggagacgattttattcctaacgacattctaataggctgcgaggaagaagcagag
gaacatggcaaagcctattgtgtgcttgtgactggaccaaatatggggggcaagtctaca
ctcataagacaggctggtctgttggctgtgatggcccagctgggttgttacgtacctgct
gagaagtgcaggctcacaccagttgacagagtgtttactaggcttggtgcctcagataga
ataatgtcaggagaaagcacattttttgttgagttgagtgaaactgctagcatactcagg
catgcaacagcacattctttggtacttgtggatgaattaggaagaggcaccgcaactttt
gatgggacagcgatagccaatgcggttgttaaagaacttgctgaaaccataaagtgtcga
acactgttttctacacactatcattcattagtagaagattattctaaaagtgtttgtgtg
cgcctaggacatatggcatgcatggtagaaaatgaatgtgaggaccccagccaggagact
attactttcctctataaattcattaagggagcttgtcctaagagctatggctttaatgca
gcaaggcttgctaatctcccggaggaggttattcagaagggacacagaaaggcaagagaa
tttgagaggatgaatcagtcattacagctatttcgggaagtttgtctggctactgaaaag
ccgactataaacggtgaagctatccataggctgctggccttgattaacggattgtag

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