KEGG   Mus musculus (house mouse): 18472
Entry
18472             CDS       T01002                                 
Symbol
Pafah1b1, LIS-1, Lis1, MMS10-U, Mdsh, Ms10u, Pafaha
Name
(RefSeq) platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu00565  Ether lipid metabolism
mmu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    18472 (Pafah1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    18472 (Pafah1b1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    18472 (Pafah1b1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    18472 (Pafah1b1)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18472 (Pafah1b1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160 LisH eIF2A Nucleoporin_N Ge1_WD40 Pox_A_type_inc ARMC9_LisH LisH_2 DUF6813
Other DBs
NCBI-GeneID: 18472
NCBI-ProteinID: NP_038653
MGI: 109520
Ensembl: ENSMUSG00000020745
UniProt: P63005 Q5SW18
Structure
Position
11:complement(74564775..74615210)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcccagagacaacgagatgaactaaatcgagctatagcagattatcttcgt
tcaaatggctatgaagaggcatattccgtttttaaaaaggaagctgaactagatatgaat
gaagaattagataagaagtatgctggtcttttggaaaaaaaatggacatctgttattaga
ttacaaaaaaaggtaatggaattagaatcaaaactaaatgaagcaaaagaagaatttacg
tcgggtggtcctcttggtcagaaacgggacccaaaagaatggattccccgtccacctgag
aaatacgcattgagtggtcataggagtccagttactcgagtcattttccatcctgtgttc
agtgttatggtctctgcttcagaggatgctacaattaaggtgtgggattatgagactgga
gattttgagcgaactctcaagggccatacagactctgtacaggacatttcctttgaccac
agtggcaagcttctggcttcctgttcagcagatatgacgattaaattatgggattttcag
ggttttgaatgcatcagaaccatgcacggtcacgatcacaatgtctcttcagtagccatc
atgcctaatggagatcatatagtgtctgcctcaagggataaaactataaagatgtgggaa
gtgcaaactggctactgtgtgaagacattcacaggacacagagaatgggtacgtatggtg
cggccaaatcaggatggcactctgatagccagctgttccaatgaccagactgtgcgtgtg
tgggttgtagcaacaaaggaatgcaaggctgagctccgagaacatgaacatgtggtggaa
tgcatttcctgggctccagaaagttcatattcttccatctctgaagcaacaggatctgag
actaaaaaaagtggcaagcctggacctttcttgctatctggttccagagacaaaactatt
aagatgtgggacgtcagtactggcatgtgccttatgactcttgtgggtcatgataactgg
gtacgtggagttctgttccattctggggggaagtttattttgagttgtgctgatgacaag
accctccgtgtatgggattataagaacaagcgatgcatgaagaccctcaatgcgcatgaa
cactttgttacctccttggatttccataagacggcaccctatgtggttactggcagtgta
gatcaaacagtaaaggtgtgggagtgccgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (60)   
   RefSeq(nuc) (2)   
   GenBank (29)   
   EMBL (29)   
3D Structure (2)   
   PDB (2)   
Protein domain (12)   
   Pfam (12)   
All databases (108)   

Download RDF
DBGET integrated database retrieval system