KEGG   Mus musculus (house mouse): 18626
Entry
18626             CDS       T01002                                 
Symbol
Per1, Hftm, Per, m-rigui, mPer1
Name
(RefSeq) period circadian clock 1
  KO
K21944  period circadian protein 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04710  Circadian rhythm
mmu04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    18626 (Per1)
   04713 Circadian entrainment
    18626 (Per1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    18626 (Per1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    18626 (Per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 18626
NCBI-ProteinID: NP_001152839
MGI: 1098283
Ensembl: ENSMUSG00000020893
UniProt: O35973
Structure
Position
11:68985934..69000791
AA seq 1291 aa
MSGPLEGADGGGDPRPGEPFCPGGVPSPGAPQHRPCPGPSLADDTDANSNGSSGNESNGP
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGV
LLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGTGTSAGSGLKDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPAP
SLDSDIQELSEQIHRLLLQPVHSSSPTGLCGVGPLMSPGPLHSPGSSSDSNGGDAEGPGP
PAPVTFQQICKDVHLVKHQGQQLFIESRAKPPPRPRLLATGTFKAKVLPCQSPNPELEVA
PVPDQASLALAPEEPERKETSGCSYQQINCLDSILRYLESCNIPSTTKRKCASSSSYTAS
SASDDDKQRAGPVPVGAKKDPSSAMLSGEGATPRKEPVVGGTLSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEDLPGLAPGPAPSPAPSPTVAPDPTPDAYRPVGLTK
AVLSLHTQKEEQAFLNRFRDLGRLRGLDTSSVAPSAPGCHHGPIPPGRRHHCRSKAKRSR
HHHHQTPRPETPCYVSHPSPVPSSGPWPPPPATTPFPAMVQPYPLPVFSPRGGPQPLPPA
PTSVSPATFPSPLVTPMVALVLPNYLFPTPPSYPYGVSQAPVEGPPTPASHSPSPSLPPP
PLSPPHRPDSPLFNSRCSSPLQLNLLQLEESPRTEGGAAAGGPGSSAGPLPPSEETAEPE
ARLVEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGST
SASITRSSQSSHTSKYFGSIDSSEAEAGAARARTEPGDQVIKCVLQDPIWLLMANADQRV
MMTYQVPSRDAASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVTA
CVDCGSSVQDPGHSDDPLFSELDGLGLEPMEEGGGEGGGCGVGGGGGDGGEEAQTQIGAK
GSSSQDSAMEEEEQGGGSSSPALPAEENSTS
NT seq 3876 nt   +upstreamnt  +downstreamnt
atgagtggtcccctagaaggggccgatgggggaggagaccccaggcccggagaacctttt
tgtcctggaggagtcccatcccctggggccccgcagcaccggccttgtccaggccccagc
ctggctgatgacactgatgcaaacagcaatggctcaagtggcaatgagtccaacggaccc
gagtccaggggcgcatctcagcggagttctcatagttcctcttctggcaatggcaaggac
tcagctctgctggagaccactgagagcagcaagagtacaaactcacagagcccatcccca
cccagcagctccattgcctacagcctcctgagtgcgagctcagagcaggacaacccatct
accagtggctgcagcagtgaacagtcagctcgagccaggacccagaaagaactcatgact
gcacttcgggagctcaaacttcgactgccaccagagcgtcggggcaagggccgctctggg
accttggccacactgcagtacgctctggcctgtgtcaagcaggttcaggctaaccaggaa
tattaccagcagtggagtctggaggagggtgagccttgtgccatggacatgtctacttac
accctggaggaattggagcatatcacatccgaatacacacttcgaaaccaggacaccttc
tctgtggctgtgtccttcctgacaggccggattgtctatatttcggagcaggcaggtgtc
ctgctgcgttgcaaacgggatgtgtttcggggtgcccgcttctcagagctcctggctccc
caggatgtgggtgtcttctatggctctactacaccatctcgactgcccacctggggcact
ggcacctctgcaggttcaggtctcaaggacttcacccaggaaaagtctgtcttctgccga
atcagaggaggtcctgaccgggatccagggcctcggtaccagccattccgcctaacccca
tatgtgaccaagattcgggtctcagatggagcccctgcacagccgtgctgcctactcatt
gccgagcgcatccactctggttatgaagctccccggatccctcctgacaagaggatcttc
accacccgacacacaccaagctgcctcttccaggatgtagatgaaagggctgccccactg
ctgggttaccttccccaggatctcctgggggctccagtacttctctttctacatcctgag
gaccgacccctcatgctggccattcataagaagatactgcagctggcaggccagcccttt
gaccattcccctattcgcttctgtgctcggaacggggaatatgtcaccatggacaccagc
tgggccggttttgtgcacccctggagccgcaaggtggctttcgtgttgggtcgccataaa
gtgcgcacggcacccctgaatgaggacgtcttcactcccccagcccccagcccagctccg
tccctggactctgatatccaggagctctcagagcagatccatcgattgctgctgcagcct
gtgcacagctccagccccacggggctctgtggagttggccctctgatgtcccctggtcct
ctacacagccctggctcctccagtgatagcaatgggggggacgctgaggggcctgggcct
cctgctccagtgactttccagcagatctgtaaggatgtgcatctggtaaagcaccaggga
caacagctcttcattgaatctcgggccaagcccccaccccggccccgcctccttgctaca
ggtacattcaaagccaaagtccttccctgccagtccccaaaccccgaactggaggtggcc
ccagttcctgaccaagcctcgttagccttggcccctgaggagccagagaggaaagaaacc
tctggctgttcctaccagcagatcaactgcctggacagcatcctcaggtatttggagagc
tgcaacattcccagtacaaccaagcgtaaatgtgcctcctcctcctcctacactgcctct
tcagcctctgatgatgacaagcagagggcaggtccagttcctgtgggggccaagaaagat
ccgtcgtcagcaatgctgtctggggagggggcaactcctcggaaggagccagtggtggga
ggcaccctgagcccgctcgccctggccaataaggcagagagcgtggtgtccgtcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaagacctgcctggcctggcccctggcccagcccccagtccggccccc
agccccacagtagcccctgacccaaccccagatgcttatcgcccagtgggtctgaccaag
gccgtgctgtccctgcacacacagaaggaagagcaagccttcctcaaccgcttcagagat
cttggcaggcttcgtggacttgacacctcttctgtggccccctcagcccctggctgccac
catggccccattccccctggtcgccgacaccactgccgatctaaagcaaagcgttcccgc
caccaccaccaccagaccccccggcccgaaactccctgctatgtctcccatccttcacct
gtgccctcttctggaccctggccacccccaccagccacgacccccttcccagcaatggtc
cagccctacccactcccagtattctcccctcgaggaggaccccagccccttccccctgcc
cctacatctgtgtcccctgctaccttcccttctcccttagtgaccccaatggtggccttg
gtgctccctaactatctattccctaccccacctagttatccatatggggtgtcccaggcc
cctgttgaggggccacccacgcctgcttcccactcgccctctccatccctgcccccacca
cctctcagccccccccaccgcccagactccccactgttcaactcgagatgcagctcccca
ctccagctcaatctgctgcagcttgaggagtccccccgcacggaggggggcgctgctgca
ggaggcccaggaagcagtgctgggcccctgcctcccagtgaggagactgctgagccagag
gccagattggtggaggttactgagtcgtccaatcaggatgcactttcaggctccagcgac
ctgctggagctactgctccaagaagactctcgctcgggcacaggctccgcagcctcaggc
tccctgggctctggcctgggctctgggtctggttcaggatcccacgaagggggaagcacc
tcagccagcatcacccgcagcagtcagagcagccatacaagcaagtactttggcagcatc
gactcttccgaggctgaagctggggctgctcgggccaggactgagcctggggaccaggtc
attaagtgtgtgctccaggaccccatctggctgctcatggccaatgccgaccagcgtgtc
atgatgacataccaggtgccgtccagggatgcagcctctgtgctgaagcaagaccgggag
aggctccgggccatgcagaaacagcagccacggttctcagaggaccagaggcgggaactg
ggtgctgtgcactcctgggtccggaagggccagctgcctcgggcccttgatgtgacggcg
tgtgtggactgtggcagcagcgttcaagatcctggccactctgatgaccccctcttctca
gaactggatggattggggctggagcccatggaagagggtggaggcgagggtggtgggtgt
ggtgttggcggtggtgggggtgatggtggtgaggaggcccagacccaaattggggctaag
ggttcaagctctcaggactctgccatggaggaagaagagcaaggtgggggctcatccagc
ccagctttacctgcagaagaaaacagcaccagctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (76)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (29)   
   RefSeq(nuc) (7)   
   GenBank (11)   
   EMBL (11)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (125)   

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