KEGG   Mus musculus (house mouse): 19205
Entry
19205             CDS       T01002                                 
Symbol
Ptbp1, HNRPI, PTB-1, PTB2, PTB3, PTB4, Ptb, pPTB
Name
(RefSeq) polypyrimidine tract binding protein 1
  KO
K13218  polypyrimidine tract-binding protein 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    19205 (Ptbp1)
   03041 Spliceosome [BR:mmu03041]
    19205 (Ptbp1)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     19205 (Ptbp1)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    19205 (Ptbp1)
SSDB
Motif
Pfam: RRM_5 RRM_1 RRM_8 RRM_occluded Nup35_RRM
Other DBs
NCBI-GeneID: 19205
NCBI-ProteinID: NP_001070831
MGI: 97791
Ensembl: ENSMUSG00000006498
UniProt: P17225
Position
10:79690502..79700269
AA seq 555 aa
MDGIVPDIAVGTKRGSDELFSTCVSNGPFIMSSSASAANGNDSKKFKGDNRSAGVPSRVI
HVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVAPVL
RGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQS
PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSL
DGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAPG
IMSASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAASRIAIPGLAGAGN
SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNG
HKLHGKSVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATL
HLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDL
GENHHLRVSFSKSTI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggacggcatcgtcccagacatagcagtcggtacaaagcggggatccgacgagctcttc
tccacgtgtgtcagcaacggccccttcatcatgagcagctctgcctcagcagccaatgga
aacgatagcaagaagttcaaaggtgacaacaggagcgcaggagtcccttccagagtcatc
catgtcagaaagctgcccagcgatgtcactgagggcgaggtcatctccctagggctgccc
tttggaaaggttaccaaccttctcatgctgaaggggaagaaccaggccttcattgagatg
aacacagaggaggctgccaacactatggttaactactatacatcggtggcgccagtgctt
cgtggacagcccatctacatccagttctccaaccacaaagagctcaagaccgacagctcg
cccaaccaggcacgtgcccaggcagccctgcaggctgtaaactccgtccagtctggaaac
ctggccttggcagcgtccgctgctgccgtggatgcaggaatggcaatggcagggcagagc
ccagtgctcaggatcattgtggaaaaccttttctacccagtgaccctggacgtgctgcac
cagatcttctctaagtttggcaccgtcctgaagatcatcacgttcaccaagaacaaccag
ttccaggcgctgctgcagtatgctgaccctgtgagcgcccagcatgccaagctgtccctg
gatggccagaacatctacaacgcctgctgcacgctgcgcatcgacttctccaagctcacc
agtctcaatgtcaagtacaacaatgataagagcagagactacactcgacctgacctgccc
tctggagacagccagccttcactagaccagaccatggcagcagcctttggtgcgcccggc
ataatgtcagcctctccgtatgcaggagccgggttccctcccacctttgccatccctcag
gccgcaggcctctctgtccctaatgtccatggagccttggcccccctggccatcccgtct
gctgctgctgctgctgcggccagccgcattgccatcccagggttggcaggtgctgggaat
tctgtccttttggtcagcaatctgaaccctgagagagtcacaccccaaagcctctttatt
ctcttcggcgtctacggtgatgtgcagcgggtgaagatcctgttcaataagaaggagaac
gcacttgtgcagatggcagacggcagccaggcccagctggccatgagccacctgaacggg
cacaagctgcacgggaagtcagtgcgcattacactgtccaagcatcagagtgtgcagctg
cctcgggagggtcaggaggaccagggcctgaccaaggactatggcagctccccgctgcac
cgcttcaagaaaccaggctccaagaacttccagaacatctttccaccctcagctaccctg
cacctctccaacatcccgccctctgtgtcagaggacgacctcaagagcctcttctccagc
aacggtggtgtggtcaaaggcttcaagttcttccagaaggaccgcaagatggcactgatc
cagatgggctctgtggaggaggctgtgcaggcgctgattgaactgcacaaccatgacctg
ggcgagaaccaccacctgcgagtgtccttttccaagtccaccatctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (203)   
   RefSeq(nuc) (11)   
   GenBank (96)   
   EMBL (96)   
Protein domain (5)   
   Pfam (5)   
All databases (231)   

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