KEGG   Mus musculus (house mouse): 192159
Entry
192159            CDS       T01002                                 
Symbol
Prpf8, D11Bwg0410e, DBF3/PRP8, Prp8, Sfprp8l
Name
(RefSeq) pre-mRNA processing factor 8
  KO
K12856  pre-mRNA-processing factor 8
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    192159 (Prpf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    192159 (Prpf8)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    192159 (Prpf8)
 Complex C
   U5 SnRNP specific factors
    192159 (Prpf8)
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 192159
NCBI-ProteinID: NP_619600
MGI: 2179381
Ensembl: ENSMUSG00000020850
UniProt: Q99PV0 Q3UNG1
Position
11:75377603..75400273
AA seq 2335 aa
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTVTEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq 7008 nt   +upstreamnt  +downstreamnt
atggccggagtgtttccttaccgagggccgggtaacccggtgcccggccctctagccccg
ctgccggattatatgtcagaggagaagctgcaggagaaagctcgaaaatggcagcagttg
caggccaagcgatatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgccaccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgtcatgacaaaagggtctatttgggagctcttaagtacatgcctcatgcagtcctc
aagctccttgagaacatgcccatgccttgggagcagatccgggacgtgcctgtgctgtac
cacatcactggagccatctcctttgttaacgagattccctgggttatcgagccggtttac
atctcccagtgggggtcaatgtggatcatgatgcgtagagaaaaaagagacaggaggcat
ttcaagaggatgcgtttcccccctttcgatgacgaggaaccgcccctggattatgccgac
aacatcttagatgttgagccactggaagccattcagctagagctggacccagaggaggat
gcccctgtgttggactggttctatgaccaccagcctttgagagacagtaggaagtacgtt
aatggttccacctaccaacgctggcagttcacattgcctatgatgtccacactctaccga
ctggccaatcagcttctgactgaccttgtagatgacaactacttctatctctttgatctg
aaggccttttttacctctaaggcactcaacatggccattcctgggggacccaaatttgag
cctcttgttcgagacatcaacttacaggatgaagactggaatgaatttaacgatattaat
aagatcatcatccgtcagcctattcgtactgagtacaagattgcttttccttacctgtat
aacaaccttccacaccacgtccacctgacctggtaccacactcccaacgttgtgttcatc
aagactgaggatcctgatctgccagctttctactttgatcctttgatcaacccaatctcc
catagacactcagtcaagagccaagaaccactgcctgatgatgatgaagagtttgaactc
ccagagtttgtcgagcccttcctgaaggatacacctctctatacagacaacacagccaat
ggcattgccctgctctgggcaccacggcccttcaacctacgctctggtcgtacccgccgg
gccttggacataccccttgtcaagaactggtatcgggagcactgtcctgctgggcagcct
gtgaaggttcgagtctcttatcagaagctgcttaagtactatgtgctgaatgccctcaag
caccggcctcccaaagcccagaagaagaggtatctgttccgttctttcaaagctaccaaa
ttctttcagtccaccaagctggactgggtggaggtagggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccggaagaacctcaactatctgcacttggactac
aacttcaacctgaagcctgtcaagacgctcaccaccaaggaaagaaagaaatcccgtttt
gggaatgctttccatctatgtcgggaagtactgcgtttaaccaagctggttgtggacagc
catgtgcagtatcgcttgggcaatgtagatgccttccagctggcagatggtttgcagtat
atatttgcccacgtgggacagttgacaggcatgtatcgatacaaatataagctgatgcgg
cagatccgcatgtgcaaggacttgaaacatctcatctattaccgcttcaacacgggtcct
gtagggaaaggccctggctgtggtttctgggctgctggctggcgggtctggctgttcttt
atgcgtggaattacccctctgctagagcgatggctgggcaaccttctggcccgacagttt
gaaggccgtcactcaaagggggtggcaaagacagtaacgaagcagcgggtggagtcgcac
tttgacctggagctcagggctgctgtgatgcacgacattctggacatgatgcctgaaggc
atcaagcagaacaaggcccggacaattctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacatcccttggaaggtcccaggactgccaacacctatagagaatatgattctt
cggtacgttaaggccaaggctgattggtggaccaatactgcccactacaaccgggaacgg
atccgtcgcggggctactgtagacaagactgtttgcaaaaagaacctgggccgcctcact
cgcctgtatctgaaggcagagcaggagcggcagcacaattacctgaaggatgggccttac
atcacagccgaggaggcagtggccgtgtataccaccactgtgcactggctggagagccgg
agattctcgcccatccccttccctccactctcctacaagcatgataccaagctgctcatc
ttggctctggagcgtctcaaggaagcttatagtgtgaagtctaggttaaaccagtctcag
agggaggagctgggtctgattgaacaagcctatgacaacccccatgaggctttgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaggaagtgggcattgagtttatggat
ctctatagccaccttgtaccagtgtatgatgtggaaccactggagaaaataactgatgct
tacctggaccagtacctgtggtatgaagcagataaacgccgtcttttcccaccctggatc
aagcctgctgacacagagccacctccactgcttgtttacaagtggtgtcaaggcattaat
aacctgcaggatgtgtgggagacgagtgagggcgagtgcaacgtcatgctggagtctcgg
tttgagaagatgtatgagaagattgacctgaccctgcttaacaggctgctgcgactcatt
gtggaccacaacatagctgactacatgacggccaagaacaacgtagtcatcaactataag
gacatgaaccatacaaactcatatggaatcatcagaggcctgcagtttgcctcattcatt
gtacagtactatggcttggtgatggatttgcttgtactgggattgcaccgggccagtgag
atggctgggcctcctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcacacccaatccgactcttctgtagatacattgatcgcatccatattttcttcagg
ttcacagcagatgaggctcgggatctgatccagcgttacctgacagaacacccagacccc
aacaatgaaaacattgttggctacaataacaagaaatgctggccccgagatgcccgaatg
cggctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaaaaaccgg
ctgccacgatcggtgactacagtacagtgggagaatagctttgtgtctgtgtacagtaaa
gacaaccccaacctgctattcaacatgtgtggctttgagtgccgcatcctgcctaagtgc
cgtaccagctatgaagagttcacccacaaggacggggtctggaacctacagaatgaggtt
accaaggagcggacagctcagtgcttcctgcgtgtggatgatgagtcaatgcaacgcttc
cataaccgtgtgcggcagattctgatggcctctggctccaccacgttcaccaagattgtg
aataagtggaacacagctctcatcggccttatgacatattttcgagaggctgtggtgaat
acacaggaactcctggacttattggtgaagtgtgaaaacaagatccagacacgtatcaag
attggattgaactccaagatgcctagccggttcccgcctgttgtattctacacccctaag
gagctgggtgggcttggcatgctctcgatgggccatgtgcttatcccccagtctgacctc
aggtggtccaagcagacagatgtgggcatcacacacttccgttcaggaatgagtcatgaa
gaagaccaactgattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gactcccagcgggtctgggctgagtatgcactcaagagacaagaggctattgctcagaac
agacgcttgactttagaagatttagaagattcatgggatcgaggcattccccggatcaat
accctcttccagaaagaccggcacacattggcttatgataaaggctggcgtgtccgaact
gactttaagcagtaccaggttttgaagcagaaccccttttggtggacacatcagcggcat
gatggcaagctttggaacctcaataactaccgcacagacatgattcaggcgctgggtggt
gtggagggcattctggagcacactctcttcaagggcacttacttccccacctgggagggt
ctgttctgggagaaagccagtggctttgaggagtccatgaagtggaagaagctgaccaat
gctcagcgatcaggattaaaccagattcctaatcgtagatttaccctctggtggtcccca
accatcaatcgagccaatgtctatgtgggcttccaggtgcagctggacctgacaggaatc
ttcatgcacggcaagatccccacactgaagatctctctcatccagatattccgagctcac
ttgtggcagaagatccatgagagcatcgtgatggacttgtgtcaggtctttgaccaggaa
ctggatgcactggaaattgagacagtgcaaaaggagacaatccatccccgaaagtcctat
aagatgaactcttcctgtgcggatatactactctttgcctcctataagtggaatgtctcc
cggccctcgctgctggcagactccaaggatgtgatggacagcaccaccacacagaagtat
tggattgacatccaattacgctggggagactatgattcccatgatattgagcgctatgcc
cgggccaagttcctggattacaccacagacaacatgagtatctacccttcgcccacaggc
gtgctcattgccattgatctggcctataatctacacagtgcctatggaaactggttcccg
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgcgttg
tatgtgttacgtgaacggatacgcaaaggattacagctgtattcatctgagcccactgag
ccttacctgtcctctcagaactatggtgaactcttctctaaccagattatctggtttgtg
gatgacaccaatgtctatagagtaactatccacaagacctttgaggggaacttgacaact
aaacccatcaatggggccatcttcatcttcaatccacgaacgggacagctgttcctcaag
ataatccacacatctgtatgggctggacagaagcgtttgggtcagttggccaagtggaag
actgctgaggaagtggctgccctgatccgatctctgcctgtggaggaacagcctaaacag
atcattgtcactcggaagggcatgctggatcctctggaggtccacttactggatttcccc
aatattgtgatcaaaggatcggagctccagctgcccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccaccgagccccagatggtccttttcaacctctat
gatgactggctcaagactatctcctcctacacggctttctcccgtctcattctgattctg
cgggctttgcatgtgaacaatgatagagcaaaggtgatcctgaagccagacaagactact
gttacggaaccccaccacatctggcccacgctgactgacgaggaatggatcaaggtggag
gtacagctcaaggatctgatcttggctgactacggcaagaaaaacaacgtgaatgtggcg
tcactgacacagtcagaaattcgagacatcatcctgggaatggagatctcggcgccatcg
cagcagcggcagcagatagctgagattgaaaagcagaccaaggaacagtcccagctcact
gctacacagactcgaactgtcaacaagcacggtgacgagattatcacttcaaccactagc
aactatgagacccagaccttctcatcaaagactgaatggagagtcagggccatctctgct
gccaacctgcatctgcggaccaatcatatttatgtttcatctgatgacattaaggagact
ggttatacgtacattcttccgaaaaacgtgcttaagaagttcatctgcatatctgatctt
cgtgcccaaattgcaggatacctgtatggggtgagccctccagataaccctcaggtgaag
gagatccgttgtattgtgatggtgccgcagtggggcacgcaccagactgtgcacctgccc
agccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgaatccccccagctatcaccccaagatgtcaccactcatgccaaaatcatg
gctgacaacccatcttgggatggggagaagactattatcatcacgtgcagcttcacacca
ggctcctgcacactgacagcctacaagctgacacccagtgggtatgagtggggccggcag
aacacagacaaaggcaacaaccccaaaggctacctaccctcgcactacgagagggttcag
atgctcctgtctgaccgattcctcggcttcttcatggtccccgcccagtcctcctggaac
tacaactttatgggtgttcgacatgatcccaacatgaaatacgagctgcagctggcaaac
cccaaggaattctaccatgaggtccacaggccctcccacttcctcaacttcgcccttctg
caggagggtgaggtctactctgcagacagagaggacctctatgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (300)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (293)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (35)   
   RefSeq(nuc) (1)   
   GenBank (17)   
   EMBL (17)   
Protein domain (8)   
   Pfam (8)   
All databases (351)   

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