KEGG   Mus musculus (house mouse): 19285
Entry
19285             CDS       T01002                                 
Symbol
Cavin1, 2310075E07Rik, Cav-p60, Cavin, Ptrf
Name
(RefSeq) caveolae associated 1
  KO
K19387  polymerase I and transcript release factor
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    19285 (Cavin1)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    Transcription termination factors
     19285 (Cavin1)
SSDB
Motif
Pfam: PTRF_SDPR DUF1664 Peptidase_M3
Other DBs
NCBI-GeneID: 19285
NCBI-ProteinID: NP_033012
MGI: 1277968
Ensembl: ENSMUSG00000004044
UniProt: O54724
Structure
Position
11:complement(100847562..100861443)
AA seq 392 aa
MEDVTLHIVERPYSGFPDASSEGPEPTQGEARATEEPSGTGSDELIKSDQVNGVLVLSLL
DKIIGAVDQIQLTQAQLEERQAEMEGAVQSIQGELSKLGKAHATTSNTVSKLLEKVRKVS
VNVKTVRGSLERQAGQIKKLEVNEAELLRRRNFKVMIYQDEVKLPAKLSVSKSLKESEAL
PEKEGDELGEGERPEDDTAAIELSSDEAVEVEEVIEESRAERIKRSGLRRVDDFKKAFSK
EKMEKTKVRTRENLEKTRLKTKENLEKTRHTLEKRMNKLGTRLVPVERREKLKTSRDKLR
KSFTPDHVVYARSKTAVYKVPPFTFHVKKIREGEVEVLKATEMVEVGPEDDEVGAERGEA
TDLLRGSSPDVHTLLEITEESDAVLVDKSDSD
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggaggatgtcacgctccatatcgttgagcggccgtattccggatttcccgatgcttcc
tcagagggcccggagcccacccaaggggaggcgcgggccacggaggagccgtcggggacc
ggctccgacgagctgatcaagtcggaccaggtgaacggtgtgctggtgctgagccttctg
gataaaatcatcggcgccgttgaccagatccagctgacccaagcccagctggaggagcga
caggcggagatggagggcgctgtgcagagcatccagggagagctgagcaagctgggcaag
gcgcacgccaccacgagcaacaccgtgagcaagttgctggagaaggtgcgcaaggtcagc
gtcaacgtgaagaccgtgcgcggcagcctggagcgccaggccggccagataaagaaactg
gaggtcaacgaggcggagctgctgaggcgccgcaacttcaaagtcatgatctaccaggat
gaagtcaagctgccggccaaactgagcgtcagcaagtcgctgaaagagtcggaggcactg
cctgagaaggagggtgacgagctgggcgagggcgagcggcccgaggatgacaccgcggcg
atcgagctgtcgtccgacgaggcggtggaggtggaggaggtgatcgaggagtcccgcgcc
gagcgcatcaagcgcagcggcctgcggcgcgtggacgacttcaagaaggccttctccaag
gagaagatggagaagaccaaggtgcgcacgcgtgagaacctggagaagacgcgcctgaag
accaaggagaacctggagaagacacggcacacgctggagaagcgcatgaacaagctgggc
acgcgcctggtgcccgtggagcgacgagagaagctgaagacatcccgggacaagctgcgc
aagtccttcacgcccgaccatgtggtgtatgcgcgctccaagaccgctgtctacaaggtg
ccgcctttcaccttccacgtcaagaagatccgcgagggcgaggtggaggtgctgaaggcc
accgagatggtggaggtgggtcccgaggacgacgaggttggcgcggagcgcggcgaggcc
actgacctgctgcgcgggagcagccccgacgtgcacacgctgctggagatcaccgaggag
tcggacgccgtcctggtggacaagagcgacagcgactga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (27)   
   RefSeq(nuc) (3)   
   GenBank (12)   
   EMBL (12)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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