KEGG   Mus musculus (house mouse): 19373
Entry
19373             CDS       T01002                                 
Symbol
Rag1, Rag-1
Name
(RefSeq) recombination activating 1
  KO
K10628  V(D)J recombination-activating protein 1 [EC:2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04068  FoxO signaling pathway
mmu05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    19373 (Rag1)
 09160 Human Diseases
  09163 Immune disease
   05340 Primary immunodeficiency
    19373 (Rag1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    19373 (Rag1)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     19373 (Rag1)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    19373 (Rag1)
SSDB
Motif
Pfam: RAG1 RAG1_imp_bd zf-RAG1 zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_10 zf-RING_2 zf-C3HC4_4
Other DBs
NCBI-GeneID: 19373
NCBI-ProteinID: NP_033045
MGI: 97848
Ensembl: ENSMUSG00000061311
UniProt: P15919 Q3TR87
Structure
Position
2:complement(101468597..101479877)
AA seq 1040 aa
MAASLPSTLSFSSAPDEIQHPQIKFSEWKFKLFRVRSFEKAPEEAQKEKDSSEGKPYLEQ
SPVVPEKPGGQNSILTQRALKLHPKFSKKFHADGKSSDKAVHQARLRHFCRICGNRFKSD
GHSRRYPVHGPVDAKTQSLFRKKEKRVTSWPDLIARIFRIDVKADVDSIHPTEFCHDCWS
IMHRKFSSSHSQVYFPRKVTVEWHPHTPSCDICFTAHRGLKRKRHQPNVQLSKKLKTVLN
HARRDRRKRTQARVSSKEVLKKISNCSKIHLSTKLLAVDFPAHFVKSISCQICEHILADP
VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSLMVKCPAQDC
NEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFAD
KEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQ
YHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSG
LASSVDEYPVDTIAKRFRYDSALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKESCD
GMGDVSEKHGSGPAVPEKAVRFSFTVMRITIEHGSQNVKVFEEPKPNSELCCKPLCLMLA
DESDHETLTAILSPLIAEREAMKSSELTLEMGGIPRTFKFIFRGTGYDEKLVREVEGLEA
SGSVYICTLCDTTRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRDRVKGVS
AKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKHPNASKEERKRWQATLDKHLRKR
MNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPAK
ECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEG
NESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKSSGFTMNSKE
TLGDPLGIEDSLESQDSMEF
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggctgcctccttgccgtctaccctgagcttcagttctgcacccgatgaaattcaacac
ccacaaatcaaattttccgagtggaaatttaagctgtttagggtgagatcctttgaaaag
gcacccgaagaagcacagaaggagaaggattcctcagaggggaaaccttacctagaacag
tctccagtagttccagagaagcctggtggtcagaactcaattctgactcaacgagcactg
aaactccatcctaaattttcaaagaaattccatgctgatgggaagtcaagcgacaaagca
gttcaccaagccaggcttagacacttctgccgcatctgtgggaatcgtttcaagagtgac
gggcacagccggagatacccagtccacgggcccgtggacgctaaaacccaaagtcttttc
cgaaagaaggaaaaaagagtcacttcctggccagacctcattgccaggattttccggatc
gacgtgaaggcagatgttgactccatccacccgacggaattctgccatgactgttggagc
atcatgcacagaaagttcagcagttcccacagtcaggtctacttcccaaggaaagtgacc
gtggagtggcacccccacacaccgtcctgtgacatctgttttactgcccatcggggactc
aagaggaagagacatcagcccaatgtgcagctcagcaagaaactaaaaactgtgctcaac
cacgcgagacgggaccgtcgcaagagaactcaggctagggtcagcagcaaggaagtcctg
aagaagatctccaactgcagtaagattcatctcagtaccaagcttcttgccgtggacttc
ccagcacactttgtgaaatccatctcctgccagatatgcgaacacattctggctgatccc
gtggagaccagctgcaagcatctattctgtaggatctgcattctcagatgtctcaaagtc
atgggcagctattgtccctcttgccgatatccgtgcttccctactgacctggagagccca
gtgaagtcctttctgaacatcttgaattctctcatggtcaagtgtcccgcgcaagattgc
aatgaggaagtgagtctggaaaaatataaccaccatgtgtcaagccacaaagaatctaaa
gagactttggtgcatatcaataaagggggacggcctcgccagcatctcctgtcactgacg
agaagggcgcagaaacatcggctgagggagctcaagattcaagtcaaagaatttgctgac
aaagaagaaggtggagatgtgaaggctgtctgcttgacattgtttctcctggcactgagg
gcgaggaatgagcacaggcaagctgatgaattagaggccatcatgcaaggcaggggctcc
gggcttcaaccagctgtttgcttggccatccgtgtcaataccttcctcagctgtagccaa
taccataagatgtacaggactgtgaaagctatcactgggaggcagatttttcaacctttg
catgctcttcggaatgccgagaaagtccttctgccaggctaccatccctttgagtggcag
cccccactgaagaatgtgtcctccagaactgatgttggaattattgatgggctgtctgga
cttgcctcctctgtggatgagtacccagtagataccattgcgaagaggttccgctacgac
tctgctttggtgtctgctttgatggacatggaagaagacatcttggaaggcatgagatcc
caagatcttgatgactacctgaatggtcccttcacagtggtggtaaaggagtcttgcgat
ggaatgggggatgtgagtgagaagcacgggagtgggcccgcagttccagaaaaggccgtt
cgtttctctttcacagtcatgagaattacgatagagcatggttcacagaacgtgaaggtg
tttgaggaacccaagcccaattctgaactgtgttgcaagccgttgtgtcttatgctggca
gatgagtctgaccatgagacccttactgctattctaagccccctcattgccgagagggag
gccatgaagagcagtgaattaacgctggagatgggaggcatccccaggacttttaaattc
atcttcaggggcactggatacgatgaaaaacttgtccgggaagtagaaggcttggaagct
tctggctcagtctacatctgtacactctgtgacaccacccgtttggaagcctctcagaat
cttgtcttccactccataaccagaagccacgccgagaacctgcagcgctatgaggtctgg
cggtccaatccgtatcatgagtccgtggaagagctccgggaccgggtgaaaggggtctct
gccaaacctttcatcgagacagtcccttccatagatgcgcttcactgtgacattggcaat
gcagctgaattctataagattttccagctggagataggggaagtgtataaacatcccaat
gcctctaaagaggaaaggaagagatggcaggccacgctggacaaacatctccggaaaagg
atgaacttaaaaccaatcatgaggatgaatggcaactttgcccggaagcttatgacccaa
gagactgtagacgcagtttgtgagttaattccttctgaggagaggcatgaagctctcagg
gagctcatggacctttacctgaagatgaaacccgtgtggcgctcttcatgtcccgctaaa
gagtgtccagagtccctctgtcagtacagtttcaactcacagcgtttcgcggaactcctc
tccaccaagttcaaatatagatacgagggcaaaatcaccaattactttcacaaaaccttg
gcacatgtccctgaaattattgaaagggatggctctatcggggcctgggcaagtgaggga
aatgaatcgggtaacaagctgtttagacggtttcggaaaatgaatgccaggcagtccaag
tgctatgagatggaagatgtcctgaaacatcactggctgtatacttcaaaatacctccag
aagtttatgaatgctcataacgcgttaaaaagctctgggtttaccatgaactcaaaggag
accttaggggaccctttgggcattgaggactctctggaaagccaagattcaatggagttt
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
3D Structure (25)   
   PDB (25)   
Protein domain (9)   
   Pfam (9)   
All databases (76)   

Download RDF
DBGET integrated database retrieval system