KEGG   Mus musculus (house mouse): 19377
Entry
19377             CDS       T01002                                 
Symbol
Rai1, Gt1
Name
(RefSeq) retinoic acid induced 1
  KO
K19749  retinoic acid-induced protein 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    19377 (Rai1)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    19377 (Rai1)
SSDB
Motif
Pfam: zf-HC5HC2H zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 19377
NCBI-ProteinID: NP_001032853
MGI: 103291
Ensembl: ENSMUSG00000062115
UniProt: Q61818 Q5QGZ6
Position
11:59995743..60090023
AA seq 1889 aa
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYSPQPYTGYE
GGTGTPSGTVATAAADKYHRGSKSLQGRPAFPSYVQDSSPYPGRYSGEEGLQTWGGPQPP
PPQPQPLPGAVSKYEENLMKKTVVPPPNRQYPEQGPQLPFRTHSLHVPPPQPQQPLAYPK
LQRQKPQNDLASPLPFPQGSHFPQHSQSFPTSSTYAPTVQGGGQGAHSYKSCTAPSAQPH
DRPMSANANLAPGQRVQNLHAYQPGRLGYEQQQQALQGRHHTQETLHYQNLAKYQHYGQQ
GQGYCPPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPL
STGAFPTGITDHSHFMPLLNPSPTDAASSVDPQAGNCKPLQKEKLPDNLLSDLSLQSLTA
LTSQVENISNTVQQLLLSKATMPQKKGVKNLVSRTPEQHKSQHCSPEGSGYSAEPAGTPL
SEPPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNSNSKAKPESVSTCS
VTSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEA
IVEKADKAWAEASSLPKDNGKPPFSLENHGACLDTVAKTSWSQPGEPETLPEPLQLDKGG
STKDFSPGLFEDPSVAFATTDPKKTSSPLSFGTKPLLGTATPDPTTAAFDCFPDTPTASS
VDGANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDGVGKADAHEASACMGFQEDH
AIGKPAAALSGDFKQQEAEGVKEEVGGLLQCPEVAKANQWLEESRHCCSSTDFGDLPLLP
PPGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLMCTKEEAEEALDTKAGWVSP
CHLSGEPAVLLGPSVGAQSKVQSWFESSLSHMKPGEEGPEMERAPGSSGTSQGSLAPKPN
KPAVPEGPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRVPALPKDLLLPESCTGPPQGQ
AEGAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKR
VGKPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPSMPGKDQRSMVLRSRTKPQQVFH
AKRRRPSESRIPDCRATKKLPANNHLPTAYKVSSGPQKEGRMNQRVKVPKPGTGNKLSDR
PLHTLKRKSAFMAPVPAKKRSLILRSNNGSGGDGREERAESSPGLLRRMASPQRARPRGS
GEPPPPPPLEPPAACMGLSTQSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLAC
RVAGAPPGTPRSPALPERRPGGSPAGAEEGLGGMGQMLPAASGADPLCRNPASRSLKGKL
LNSKKLSSAADCPKAEAFMSPETLPSLGTARAPKKRSRKGRTGTLGPSKGPLEKRPCPGQ
PLLLAPHDRASSTQGGGEDNSSGGGKKPKTEELGPASQPPEGRPCQPQTRAQKQPGQASY
SSYSKRKRLSRGRGKTAHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADSR
TPAFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSSAASSSTSSSSLEPAGASLTTF
PGGSVLQQRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCL
PKKKPKLKEKARLEGTLEEASLPLERTLKGLECSASTTAAAPTTATITTPTALGRLSRPD
GPADPAKQGPLRTSARGLSRRLQSCYCCDGQGDGGEEVAQADKSRKHECSKEAPTEPGGD
TQEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHEPGATISCSYKGCIHTY
HYPCANDTGCTFIEENFTLKCPKHKRLPL
NT seq 5670 nt   +upstreamnt  +downstreamnt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacagacc
tcccaggagacatcgcgcctggagaactacaggcagccgggtcaggctgggctaagctgt
gatcggcagcggctgctggccaaggactactacagccctcagccctatacaggctatgag
ggtggcactggtacaccttctggcacggtggccacagcagctgcagacaagtaccaccga
ggcagcaaatccctgcaggggaggccagctttccccagctatgttcaagacagcagcccc
tacccagggcgctactctggcgaggaaggtcttcagacctgggggggcccacagccaccg
cctcctcagccacagcctctgcccggggcagtgagcaagtatgaggagaacctgatgaag
aagacagttgtgcctcctccaaacaggcagtaccctgagcagggcccccagcttcccttc
cggactcacagcctgcatgtcccaccaccacagcctcagcagcccctggcttaccccaaa
ctccaaaggcagaaaccacagaacgaccttgcctcccctctgcccttcccccagggcagc
cactttccccagcattcccagtccttccctacctcctccacttatgccccaacagtgcag
ggtggtgggcagggggcccactcctacaagagctgcacagcaccatctgcccagcctcat
gataggccgatgagtgccaatgcgaacctggctccagggcaacgggtccagaatcttcac
gcttaccagcctggccgccttggctacgagcagcagcagcaagcacttcaaggccgtcac
cacacccaggaaacactccactaccagaacctcgccaagtaccaacactatggacagcaa
ggccagggctactgtccaccggacacagctgtcaggactccagagcagtattaccagact
ttcagcccgagctccagccactcccctgcacggtctgtgggtcgctccccttcctatagc
tccaccccgtcaccactgatgcccaatctggagaacttcccctatagccagcagccgctt
agtactggggccttccccacaggcatcacagaccacagccactttatgcccctgcttaac
ccgtccccaacagatgctgccagctctgtggacccccaggccggcaactgcaagcccctg
caaaaggagaagctgcctgacaacttgctctccgacctcagcctgcagagcctcacagcg
ctcacctcccaggtggaaaacatctccaacaccgtgcagcagctcttgctgtccaaagct
accatgccacagaagaaaggggtcaagaacctcgtgtccaggactccagagcagcacaaa
agccagcactgtagccctgaaggcagcggctactcagctgagccagcgggcacaccgctg
tctgagccgccgagcagcacgccacagtccacccatgctgagccacaggacactgactac
ctgagtggctctgaggacccgctagagcgcagcttcctctactgcagccaggcccggggc
agccccgccagggtcaacagcaactccaaggctaagcccgagtctgtgtccacctgttct
gtgacctcacctgatgacatgtccaccaagtccgacgactctttccagagcctgcacagt
actctgcccctggacagcttctccaaatttgtggcaggcgagcgggactgcccgcggctg
ctgctcagtgccctggcacaggaagatctggcctccgagatcctgggactgcaggaagcc
attgttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacaatggc
aagccacccttctcactggagaaccatggcgcctgcctggacactgtagcaaagacttca
tggtcacagccaggggagccagagaccctccctgagcctttgcagctggacaagggtggc
agcaccaaggacttcagcccggggctgtttgaagacccctctgtggcctttgccaccact
gacccgaagaaaacaagcagtcccctgtccttcggcaccaagcctttgctagggactgcc
actcctgaccccaccacagcagcatttgactgctttccagatacacccactgccagctcg
gtggatggtgccaacccctttgcctggccagaggagaacctgggcgatgcttgtcctcgt
tggggcctccaccctggtgagcttaccaagggcttggaacagggtgcaaaagcctcggac
ggcgtgggcaaggcagatgcacacgaggcctctgcttgcatgggcttccaggaggatcat
gccatcgggaagccagcagccgcactgtccggggacttcaaacagcaggaggcagagggg
gtgaaagaggaggtgggtgggttgctgcagtgccccgaggtggccaaggccaaccagtgg
ctggaggagagccgccattgctgttcctccactgacttcggggacctgccactgttgccg
ccccctggcaggaaggaggacctggaagctgaagaggagtactcttctctgtgtgaactg
ctggggagccctgagcagaggcccagcctgcaggacccgttgtccccaaaggccccgctg
atgtgcaccaaggaggaggcagaggaggcgctggacaccaaggctggctgggtctctcca
tgtcacctctctggggagcctgctgtcctactgggcccctctgtgggtgcccaatcaaag
gttcagagctggtttgaatcttctctgtcacacatgaagccgggagaagaagggccagag
atggagagggctccaggtagttccggcacctcacaaggctccttggccccgaagcctaac
aagcctgctgtacctgaggggcccattgctaagaaagagcctgtgccacggggtaagagc
ttacggagccggcgagtacaccgggggctgcctgaggcggaagactctccgtgcagggtg
ccagcacttcccaaagacctcttgctcccagagtcttgcacagggcctccacagggacag
gccgagggggctggagccccaggccgggggctgtcagaagggctccccagaatgtgtacc
cgctcgcttacagctctgagtgagccccagactcctggacctccgggcctgactaccacc
cccacgcctcccgacaaactgggaggtaagcagcgagctgccttcaagtctggcaagcgg
gtcggaaaaccatcacccaaggctgcatccagccccagcaaccctgctgccctgcctgtt
gcctcagacagcagccccatgggctccaagaccaaggagccagactctcccagcatgcct
ggcaaggaccagcgctccatggtcctccggtctcgcaccaaaccccagcaggtcttccat
gccaaacggcggcggccctcggagagccggatcccagactgccgtgccaccaagaagctc
cctgctaacaaccatttacccactgcgtacaaggtctccagtgggccccagaaggaaggt
cggatgaaccagcgggtcaaagtacccaagcctggtacaggaaacaagctttcagatcgg
cctctccacacgctcaagaggaagtcggctttcatggcacctgtccccgccaaaaaacgg
agcctcatcctgagaagcaacaatggaagtgggggagacgggagggaggagagggctgag
agttcccctggcctcttacggaggatggcctcaccccagagggccagacccaggggtagt
ggggagccacccccacccccacccttggagccacctgctgcatgcatggggttgtctaca
cagtcatccctgcccagtgctgtgaggaccaaggtgctgccaccgcgaaagggccgcggc
ctcaagctggaggccatagtacagaagatcacctcacctgggctcaagaaactcgcatgc
agagtggcaggggcccctcctgggacaccccggagcccagccctgcctgagagacgtcca
gggggcagtccagccggggcggaagagggtttaggaggaatggggcaaatgctaccagca
gcttccggagctgacccattgtgcaggaacccagccagcaggtccctaaaaggtaaactc
ttgaacagtaagaagctgtcctctgctgctgactgccccaaagctgaggccttcatgtcc
ccggagaccctgccatcactagggactgcccgagcaccgaagaaaaggagccggaaaggc
agaactgggaccttgggaccctccaaaggtccgttggagaagcggccatgtccgggccag
cctctgctcctcgctccccacgacagggccagcagcactcagggcggaggcgaggacaac
tccagtggaggaggcaagaagccaaagacagaggagctgggaccggcctcccagccccct
gaaggccggccctgccagccccagacaagggcgcagaagcagccgggccaagccagctac
agcagctattccaagcggaagcgcctcagccgaggccgggggaagaccgcccacgcttca
ccctgtaagggacgtgccactcggagaaggcagcagcaggtactgcccctggatcctgca
gagcctgaaatccgactcaaatacatttcctcttgcaagaggctgcgggcagacagccgc
accccagccttctcgccctttgtgcgggtggagaagcgagatgcttacaccaccatatgc
actgtcgtcaactccccgggggatgagccgaagcctcactggaagccatcctcctctgct
gcctcctcctccacctcttcctcctccttagaaccagctggggcttctctgaccacattc
cctggaggctctgtgctgcagcagaggccctccctgcccctctcctccaccatgcatctg
gggcctgtggtgtccaaggccctaagtacctcttgccttgtctgctgcctctgccaaaac
ccggccaatttcaaggaccttggggacctctgtggcccctactaccctgaacactgcctc
cccaaaaagaagccaaaactcaaggagaaggcgcggctggagggcaccttggaggaggcc
tctctgcctctcgagagaacactcaaaggcctggaatgttcggccagcaccacggctgcc
gcccctaccacagccactatcactacccccacggccctggggagactgtccaggcccgat
ggcccagctgaccctgccaagcagggccccctgcgcaccagtgcccggggcctgtcacgg
cggctgcagagttgctattgctgtgatggtcagggggacgggggtgaggaggtggcccag
gctgacaagagccgcaaacatgaatgcagcaaagaggcccctacagaacctggtggggac
acccaggaacactgggtccatgaggcctgtgctgtgtggaccagcggggtgtacctggtg
gccgggaagctctttgggctgcaggaggccatgaaggtagctgtggacatgccgtgtacc
agctgtcacgagcccggggcgaccatctcgtgctcctataaaggatgtatccacacctac
cactacccatgtgccaatgacacaggttgcacgttcattgaggagaattttactttgaag
tgccccaaacataagaggctgccgttgtaa

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