KEGG   Mus musculus (house mouse): 19401
Entry
19401             CDS       T01002                                 
Symbol
Rara, Nr1b1, RAR, RARalpha1
Name
(RefSeq) retinoic acid receptor, alpha
  KO
K08527  retinoic acid receptor alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04659  Th17 cell differentiation
mmu04915  Estrogen signaling pathway
mmu05200  Pathways in cancer
mmu05202  Transcriptional misregulation in cancer
mmu05221  Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    19401 (Rara)
  09152 Endocrine system
   04915 Estrogen signaling pathway
    19401 (Rara)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    19401 (Rara)
   05202 Transcriptional misregulation in cancer
    19401 (Rara)
  09162 Cancer: specific types
   05221 Acute myeloid leukemia
    19401 (Rara)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    19401 (Rara)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mmu03310]
    19401 (Rara)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    19401 (Rara)
Nuclear receptors [BR:mmu03310]
 1. Thyroid hormone like
  1B. Retinoic acid receptor (RAR)
   19401 (Rara)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 19401
NCBI-ProteinID: NP_001170773
MGI: 97856
Ensembl: ENSMUSG00000037992
UniProt: P11416 Q3U3R3
Position
11:98818626..98865768
AA seq 462 aa
MASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTSLQHQLPVSGYSTPSPAT
IETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHRDKNCIINKVTRNRCQYCRLQKCFDVGMSKESVRNDRNKKKKEAPKPECSESYTL
TPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALK
VYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
DTLSGQSGGGTRDGGGLAPPPGSCSPSLSPSSHRSSPATQSP
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggccagcaatagcagttcctgcccaacacctgggggcgggcacctcaatgggtaccca
gtacccccctacgccttcttctttccccctatgctgggtggactctccccacccggcgct
ctcaccagcctccagcaccagcttccagtcagtggttacagcacaccgtccccagccacc
atcgagacccagagcagcagttccgaagagatagtacccagccctccctcaccaccgccc
ctgccccgcatctacaagccttgctttgtttgtcaagacaaatcatccggctaccactat
ggggtcagcgcctgtgagggctgtaagggcttcttccgacgaagcatccagaagaacatg
gtgtatacgtgtcaccgggacaagaactgcatcatcaacaaggtgacccggaaccgctgc
cagtactgccggctgcagaaatgtttcgacgtgggcatgtccaaggagtcggtgcgaaac
gatcgaaacaaaaagaagaaagaggcacccaagcccgagtgctcagagagctacacgctg
acgcctgaggtgggcgagctcattgagaaggttcgcaaagcgcaccaggagaccttcccg
gccctctgccagctgggcaagtacactacgaacaacagctcagaacaacgagtctccctg
gacattgacctctgggacaagttcagtgaactctccaccaagtgcatcattaagactgtg
gagttcgccaagcagcttcccggcttcaccaccctcaccatcgccgaccagatcaccctc
ctcaaggctgcctgcctggatatcctgattctgcgaatctgcacgcggtacacgcctgag
caagacacaatgaccttctcagatggactgaccctgaaccggactcagatgcacaacgct
ggctttggccccctcaccgacttggtctttgccttcgccaaccagctgctgcccctggag
atggacgatgctgagactggactgctcagtgccatctgcctcatctgtggagaccgacag
gacctggagcagccagacaaggtggacatgctgcaagagccgctgctggaagcactgaaa
gtctacgtccggaaacggaggcccagccgaccccacatgttccccaagatgctgatgaag
atcacagaccttcggagcatcagcgccaagggagctgaacgggtgatcacattgaagatg
gagatcccaggctccatgccaccgctgatccaggaaatgctggagaactctgagggcttg
gacactctaagcggacagtcggggggcggaacacgagatgggggtggcctggccccccct
ccgggtagctgtagccccagcctcagtcccagctcccacagaagcagcccagccacccaa
tccccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (13)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (48)   
   RefSeq(nuc) (10)   
   GenBank (19)   
   EMBL (19)   
Protein domain (2)   
   Pfam (2)   
All databases (86)   

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