KEGG   Mus musculus (house mouse): 19724
Entry
19724             CDS       T01002                                 
Symbol
Rfx1
Name
(RefSeq) regulatory factor X, 1 (influences HLA class II expression)
  KO
K09173  regulatory factor X 1/2/3
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    19724 (Rfx1)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Other basic domains
   RF-X
    19724 (Rfx1)
SSDB
Motif
Pfam: RFX1_trans_act RFX_DNA_binding
Other DBs
NCBI-GeneID: 19724
NCBI-ProteinID: NP_033081
MGI: 105982
Ensembl: ENSMUSG00000031706
UniProt: P48377
Position
8:84789787..84823630
AA seq 963 aa
MATQSYVTELQAAPQASQPPQAPPQALPQPPPPAAPQPPAAATPQPQYVTELQSPQPQTQ
PPGSQKQYVAELPAAPAPSQPATPAPSPVAQQYIVVTVSEGAMRASETVSEASPSSTASQ
TGVPTQVVQQVQGTQQRLLVQASVQAKPGHVSPLQLTNIQVPQQAIPTQHLVVQSPAPGT
KSGQVSLTVHSAQQVHSAPERSPVQANNSTSKTAGTPAATVQQLQVHSVQQSVPVTQERS
VVQATPQTKAGPVQQLTVQGLQPVHVAQEVQQLPQVPVPHVYSSQVQYVEGGDASYTASA
IRSSTYQYPETPIYTQTAGTSYYEASGTAAQVSTPATSQTVASSGSVPMYVSGSPIVASS
SSSEAGASNSSVGAGGNGGGGSSGGGSGGSSGSGAGTYVIQGGYMLGNASQSYSHTTRAS
PATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRR
LGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGVANGVAV
GQQSTGLSDISAQVQQYQQFLDASRSLPDFAELDLQGKVLPEGVGPGDIKAFQVLYREHC
EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPRASLVLLSKFQPV
LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV
KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC
EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFY
SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFANLATSL
NPLDPDKDEEEEEEEESEDELPQDISLAAGSESPALGPEALEPPAKLARTDTRGLFVQAL
PSS
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggcaacacagtcctatgttactgagctacaggcagccccacaagcatcccagccgcca
caggccccgccccaggccctgccccagccaccacccccagcagcaccccagcctcctgct
gcagcaaccccccagccccagtatgtcaccgagctgcaaagcccccagccccagacgcaa
cctccgggcagccagaagcagtatgtggcagagctccctgctgcccctgcaccctcacag
cctgccacacctgccccatcccctgtggctcagcagtatatcgtggtcaccgtatcggaa
ggtgccatgcgggctagtgagactgtgtcagaagccagccccagttccacggcaagccag
accggtgttcccacccaagtggtccagcaggtgcagggcacccagcagcggctgctggtc
caggcaagtgtgcaggccaagccaggccatgtgtcccccctgcagcttaccaacattcag
gtgccacagcaggctatccccacacagcacctggtggtgcagagcccagcaccgggcact
aagagtggccaggtctccctgacggtgcacagtgcccagcaggtgcactctgctcctgag
aggtcaccagtgcaggccaacaactccaccagcaagacagctgggactcctgcggccact
gtgcagcaactacaggtccacagcgtccagcagagtgtccctgtcacccaagagaggtca
gtagtccaggccactccacagaccaaagctggcccggtgcagcagctgactgtgcaggga
ctgcagccagttcacgttgctcaagaggtacagcaactccctcaggtgcctgtcccacac
gtgtattccagccaggtgcagtacgtggaaggtggcgatgccagctacacagccagcgcc
atccgctctagcacctaccagtacccggagacgcctatctacacgcagacggcaggcacc
agctactatgaggcttcgggcacggctgcccaggtcagcacgccggctacttcccagacg
gtggccagcagcggctcagtgcccatgtatgtgtccggcagcccaattgtcgccagctca
tccagcagcgaggctggggccagcaacagcagtgtgggtgcagggggcaatgggggaggc
ggcagcagtggtggtggcagtggcggcagcagcggcagcggagcaggcacctacgtgatc
caaggcggctacatgctaggcaatgccagccagtcttactcccacaccacccgtgcctca
ccagccacagtccagtggctcctggataattacgagaccgctgagggcgtgagcctgcca
cggagcaccctctactgccactacctgctgcactgccaagagcagaagctggagccagtt
aatgccgcctctttcggcaagctcatccgctcggtattcatgggtctgcgcacgcgccgt
ctgggcaccaggggcaactctaagtaccactattacggcctgcggatcaaagccagctca
cccctgctgcggctgatggaggaccagcagcacatggccatgcggggccagcccttctcc
cagaaacagaggctgaagcccatccagaagatggagggcgtggccaacggtgttgccgtg
gggcagcagagcacagggctgtcagacatcagcgcccaggtgcagcagtaccagcagttc
ctggatgcctccaggagcttgcctgattttgctgagttggacctccagggcaaagtgctg
cctgagggtgtcggtcctggggacatcaaggccttccaggtcctgtaccgggagcactgt
gaggccatcgtggacgtcatggtaaacctgcagttcacactggtagaaacgctgtggaag
accttctggagatacaaccttagccagcccagtgaggctccaccactggccgtgcatgac
gaggccgagaagcggctgcccagggccagtctggtgctcctctccaagttccagcctgtg
cttcagtggaccaagcactgtgacaatgtgctgtaccagggcctggtggagatcctcatc
cctgatgttctgcggcccatccccagtgccttgacccaagcaatccggaactttgccaag
agcctggagagctggctcacccatgccatggtgaacatccctgaggagatgctgcgggtg
aaggtggcagcagctggcgccttcgcacagacactgcggcgctacacatcgctcaaccac
ttggcgcaggcggcgcgggcagtgctgcagaacactgcacagatcaaccagatgctaagc
gacctcaatcgggtggacttcgcaaacgtccaggagcaggcctcgtgggtgtgtcgctgt
gaggaccgtgtggtgcagcgtttggagcaggacttcaaggtgacgctgcagcagcagaac
tcactggagcaatgggcagcctggctggacggcgttgtgagccaggtgctcaagccctac
cagggcagttccggcttccccaaggcggccaagctcttcctcctcaagtggtccttctac
agctccatggtaatccgggacctgaccctgcgcagtgctgccagcttcggctccttccac
ctcatccggctgctctatgacgagtacatgtactacctgatcgagcacagagtggcccag
gccaagggcgagaccccaatcgcagtcatgggagagtttgcaaacctggccacctcactg
aatcccttggaccctgacaaagatgaagaagaagaggaggaagaggagagtgaggatgag
ctgccacaagacatctcgctggcggctggcagcgagtctcccgcactaggccctgaagct
ctggagccaccagcgaaactggcgcggactgacactcgtggcctctttgtgcaggccctg
ccctccagctaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (36)   
   RefSeq(nuc) (10)   
   GenBank (13)   
   EMBL (13)   
Protein domain (2)   
   Pfam (2)   
All databases (72)   

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