KEGG   Mus musculus (house mouse): 19726
Entry
19726             CDS       T01002                                 
Symbol
Rfx3, C230093O12Rik, MRFX3
Name
(RefSeq) regulatory factor X, 3 (influences HLA class II expression)
  KO
K09173  regulatory factor X 1/2/3
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    19726 (Rfx3)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Other basic domains
   RF-X
    19726 (Rfx3)
SSDB
Motif
Pfam: RFX_DNA_binding RFX1_trans_act ThermoDBP-RP_arch
Other DBs
NCBI-GeneID: 19726
NCBI-ProteinID: NP_001159886
MGI: 106582
Ensembl: ENSMUSG00000040929
UniProt: P48381
Position
19:complement(27739121..27995287)
AA seq 749 aa
MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM
GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL
NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR
LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG
SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH
CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRLPKAKLITLCK
HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR
MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW
VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK
WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQVTGETPIAVMGEFGDL
NAVSPGNLDKDEGSEVESETDEDLDDSSEPRAKREKTELSQAFPVGCMQPVLESAVQPSL
LNPLHSEHIVTSTQTIRQCSATGNTYTAV
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgcagacttcagagacgggttcagacacaggttcgacagtgactctgcagacgtctgtg
gctagccaagcagcagtgcctacacaggtggtacagcaagtgccagtgcagcagcaggtg
cagcaggtacagacagttcagcaggtccaacatgtctacccagctcaggtgcagtatgtg
gaaggaagtgatactgtctataccaatggagcaatccgaacaacaacttatccctacaca
gaaacacagatgtacagccaaaacactggaggaaattactttgatactcaaggaagttct
gcccaggtgacaactgtggtgtcctcccacagtatggtgggtactggtgggattcagatg
ggcgtcacaggaggacaactcatcagcagctcgggaggaacctatttgatcggcaattca
atggagaactctggtcactcagtgacacacacaactcgggcctccccagcaacaattgaa
atggcgattgagacgctgcaaaagtctgacggtctgtccactcacagaagctctcttctc
aacagccatctgcaatggctgctggacaattatgagacagcggagggagtgagcctgccg
aggagcacgctgtacaaccactaccttcgacactgccaggagcacaagctggacccggtc
aatgccgcctctttcggaaaactaataaggtccatttttatggggctacgaactaggaga
ttaggcactagaggaaactccaaataccattactatgggattcgtgtgaagccagattct
cctcttaaccgtctacaagaagatatgcagtacatggctatgaggcagcagcccatgcaa
cagaagcaaaggtacaagcctatgcagaaagtggatggggttgcagatggtttcacagga
agtggccaacagacaggcacatctgttgagcaaactgtaattgcccaaagtcaacatcat
caacagtttttagatgcatctcgagcacttccagagtttggagaagttgaaatctcttct
ctgccagatggtactacctttgaggatatcaagtcactgcagagtctttatcgagagcac
tgtgaggcaatactggacgttgttgtgaatcttcagtttagcctgatagaaaaactgtgg
caaacattctggcgctattccccatctactccagccgacggcactaccatcacggaatca
agcaatctgagtgaaatagaaagtcgacttccgaaagcaaagctgataactctgtgcaaa
catgagtctatcctgaaatggatgtgtaactgtgaccatgggatgtaccaggctttggtg
gagattctcatccccgacgtccttagacccattcctagtgccttgacccaagccattcga
aatttcgcaaaaagcctagaaggttggctttcaaatgccatgaacaatattccacagaga
atgattcaaaccaaggttgccgctgtaagtgcctttgctcagactctgcgaagatacaca
tcgctcaatcacctggcccaggcagcccgcgcagtgcttcagaacacttcccagatcaac
cagatgctcagtgacctcaaccgcgttgactttgccaatgtccaggagcaggcttcctgg
gtgtgccagtgtgatgacaacatggttcagagactagaaacagacttcaagatgaccctg
cagcagcagagcactctggagcagtgggctgcttggctggacaatgtgatgatgcaagcg
ctgaagccctatgaaggaaggcccagcttcccgaaggctgctcggcagtttctgctcaag
tggtctttctacagctccatggttatccgggacttaaccttgcgcagtgctgctagcttt
ggctcctttcacctgatccggctgctctatgatgagtacatgttctacttagtagagcat
cgtgttgctcaagtgacaggagagacaccgatagcagtgatgggtgagtttggcgattta
aatgctgtatctcccggaaatctggataaagatgaaggcagcgaagtcgaaagtgagacg
gatgaagatctggatgattcttcagagcctcgggccaaaagggagaaaacggagctgagc
caggcgttcccagtaggctgcatgcagcctgttctggagagtgctgtgcagcccagcctc
ctgaaccccctacacagcgagcacatcgtcacaagtacacagaccatcaggcagtgcagc
gccacaggcaacacctacactgcagtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (35)   
   RefSeq(nuc) (17)   
   GenBank (9)   
   EMBL (9)   
Protein domain (3)   
   Pfam (3)   
All databases (68)   

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