KEGG   Mus musculus (house mouse): 19820
Entry
19820             CDS       T01002                                 
Symbol
Rlim, Ha1r, Rlim1, Rnf12
Name
(RefSeq) ring finger protein, LIM domain interacting
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    19820 (Rlim)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     19820 (Rlim)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    19820 (Rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING-like zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 19820
NCBI-ProteinID: NP_035406
MGI: 1342291
Ensembl: ENSMUSG00000056537
UniProt: Q9WTV7
Position
X:complement(103000770..103024886)
AA seq 600 aa
MENSDSNDKGSDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGESTE
EELLRRLQQIKEGPPPQSPDENRAGESSDDVTNSDSIIDWLNSVRQTGNTTRSGQRGNQS
WRAVSRTNPNSGDFRFSLEINVNRNNGSQTSENESEPSTRRLSVENMESSSQRQMENSAS
ESASARPSRAERNSAEAVTEVPTTRAQRRARSRSPEHRRTRARAERSRSPLQPTSEIPRR
APTLEQSSENEPEGSSRTRHHVTLRQQISGPELLGRGLFAASGSRNPSQGTSSSDTGSNS
ESSGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQAPNNTVTYESERGGFRRTF
SRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDSE
PSASVSSRNVERVESRNGRGSSGGGNSSGSSSSSSPSPSSSGESSESSSEMFEGSSEGGS
SGPSRRDGRHRAPVTFDESGSLPFLSLAQFFLLNEDDEDQPRGLTKEQIDNLAMRSFGEN
DALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRESVV
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggagaactcagattctaacgataaaggaagtgaccagtctgcagctcagcgcagaagt
caaatggatcgcttggatcgggaagaggctttctatcaatttgtgaataatctcagtgaa
gaagattatagacttatgagagacaacaatttgctgggcaccccaggtgaaagtactgag
gaagagttgctcagaagactacaacaaattaaagagggtccaccaccacagagccccgat
gaaaatagagctggagagtcttcagatgatgtgaccaacagtgattctataatagattgg
cttaactcagtcagacagactggaaatacaacaagaagtggtcagagaggaaaccagtcc
tggagagcagtgagccggactaatccaaacagcggtgatttcagattcagtttagagata
aatgttaaccgtaacaatggaagccaaacttccgagaatgaaagtgaaccatccactagg
cgtcttagtgtagaaaacatggagagcagcagccaaaggcaaatggaaaattctgcatct
gaatcagcatcggccagaccttctcgagcggagcgcaattcagctgaagcagtaacagaa
gtgccgaccaccagagctcagaggagggcaagaagccggagcccagagcatcggagaacc
agagcaagagctgaaagaagcaggtcccctctgcagccaacaagtgaaattccacgaaga
gctccgaccttggagcagtcttcggaaaacgagcctgaaggaagttctagaacccggcac
catgtgaccctgagacagcagatatctggaccggagttgttaggtagaggtctttttgca
gcttctggatcaagaaacccctctcaggggacaagctcttcagacacaggtagcaatagt
gaatcctcaggatctggccaaagacctccaaccatagttcttgatcttcaagtaagaaga
gttcgtcctggagaataccggcagagagatagtatagctagcagaactcgatcaagatct
caggctccgaacaacacagttacttatgaaagtgaacgtggaggttttaggcgtaccttt
tcccgttctgaacgtgcaggtgtgagaacctatgtgagtactatcaggattcctattcgc
agaatcttaaatactggattaagtgaaactacatctgttgcaattcaaaccatgttaagg
cagataatgacaggctttggtgagctaagctactttatgtacagtgacagtgattcagag
cctagtgcctcagtctccagccgaaatgtggagagagtagagtcacggaatggaagaggg
agctctggtggcggtaacagctctggttccagttccagctcaagtcctagccccagttca
agtggtgaaagttccgagagtagctcagagatgttcgaaggcagtagtgaaggaggctcg
tctggcccatccagaagagatggtcgacatagggccccagtcacatttgatgaaagtggc
tctctgccattccttagtctggctcagttttttcttttaaatgaagatgatgaagaccaa
cctagaggactcactaaagaacagatcgataacttggcaatgagaagctttggtgaaaat
gatgcattgaaaacgtgtagtgtttgcattacagaatacacagaaggcaacaaacttcgt
aaactaccttgctcccatgagtaccacgtccactgcatcgaccgctggttgtctgagaat
tccacctgtcccatttgtcgcagggcagtcttatcttctgggaacagagaaagtgttgtg
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (40)   
   RefSeq(nuc) (12)   
   GenBank (14)   
   EMBL (14)   
Protein domain (13)   
   Pfam (13)   
All databases (91)   

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