KEGG   Mus musculus (house mouse): 20227
Entry
20227             CDS       T01002                                 
Symbol
Sart1, U5-110K
Name
(RefSeq) squamous cell carcinoma antigen recognized by T cells 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    20227 (Sart1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    20227 (Sart1)
   04121 Ubiquitin system [BR:mmu04121]
    20227 (Sart1)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    20227 (Sart1)
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    20227 (Sart1)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    20227 (Sart1)
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 20227
NCBI-ProteinID: NP_058578
MGI: 1309453
Ensembl: ENSMUSG00000039148
UniProt: Q9Z315
Position
19:complement(5427551..5438731)
AA seq 806 aa
MGSSKKHRGEKEAAGTTAAAGTGGTTEQPPRHREHKKHKHRSSGGGSSGGERRKRSRERG
SERGSGRRGAEAEARSGAHGRERSQAEPSERRVKREKRDDGYEAAASSKASSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRLL
NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
FEQRRQDLYSARDLQGLTVEHAIDSFREGETVVLTLKDKGVLQDGEDVLVNVNMVDKERA
DKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADGL
RERELEEIRTKLRLQAQSLSSVGPRLASEYLSPEEMVTFKKTKRRVKKIRKKEKEVIMRA
DDLLPLGDQTQDGDFGSRLRGRGRRRVPEVEEEALEDEEKDPVAQPPPSDDTRVENMDIS
DEEDGGALPPGSPEGLEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVLEIVKKLES
RQRGWEEEEDPERKGTIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANG
GSESDGEENIGWSTVNLDEEKQHQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETT
VQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVD
ETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQE
KQKAQKTPYIVLSGSGKSMNANTITK
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggggtcgtcaaagaagcaccgtggcgagaaggaggcggccgggacgacggctgcggcc
gggactgggggcacgaccgagcagccgccacggcatcgcgagcataagaaacacaagcac
cggagcagcggcggcggcagcagcggcggcgaacgacggaagcggagccgggagcgtggg
agtgagcgcgggagcgggcggcgtggggcggaagccgaggcccgcagcggcgcgcacggt
cgcgaacgaagccaagcggagccctcggagcggcgcgtgaagcgggagaaacgcgatgac
ggctacgaggccgctgccagctccaaagccagctctggcgatgcctcatccctcagcatt
gaggagaccaataaactccgagcaaagttggggctgaagcccttggaggtcaatgctgtt
aagaaagaggcgggcaccaaggaggagcccgtggcagccgatgttatcaaccccatggcc
ttgcgacagcgggaagaactgcgggagaagctggcagctgccaaggaaaaacgcttgctg
aaccaaaaattggggaaaataaagacactgggggaggatgacccctggctggatgatact
gcagcctggatagagaggagccggcagctacagaaagagaaggacctggcagagaagcgg
gctaagctactagaggagatggaccaagagtttggtgtgagcactttagtggaggaggag
tttgagcagaggcgacaggacctgtacagtgcccgggacctgcaaggcctcactgtggaa
catgccatcgattcttttcgagaaggggagactgtggtcctcaccctcaaggacaaaggg
gtactgcaggacggggaggacgtgctggtgaatgtgaacatggtggacaaggagcgggcg
gacaagaacgtggagcttcggaaaaagaagcctgactacctgccctatgcggaagatgag
agtgtggacgatttggcacagcaaaaacctcgttctatcctggccaaatatgatgaggaa
ctggagggcgagcgaccacattccttccgtctggagcagggtgggatggccgatggcctg
agggaacgagagttagaagaaatccgcaccaagctacggctgcaggctcagtctctgagc
tccgtagggccccggcttgcctctgagtacctcagtcccgaggagatggtgaccttcaag
aagaccaaacggagagtgaagaaaatccgaaagaaggagaaggaggtgataatgcgggca
gatgacttgctgcccctgggcgaccagactcaggatggggactttggatccaggctccgg
ggccggggtcggcgccgagttcctgaggtggaggaggaggcccttgaggatgaggagaag
gaccctgtggcccagccgccaccatcggatgacactcgagtagagaacatggacatcagt
gatgaagaggatgggggagctcttccgccagggtccccagaggggctggaggaagacgag
gcagagctggagctgcagaagcagctggagaaggggcgccggctgcggcagctgcagcaa
ctgcagcagctccgagacagtggtgagaaggtgctggagattgtgaagaaactggagtct
cgccagcgcggctgggaggaggaggaggaccctgagaggaaggggaccatcgtgttcaat
gccacttctgaattctgccgcacgctgggggagatccccacctacgggttggctggcaac
cgcgaggagcaggaagagctcatggactttgaaagggatgaggagcgctcggccaacggt
ggctctgaatcagatggggaagagaacattggctggagcaccgtcaacctggatgaggag
aagcagcatcaggatttctctgcttcctctaccaccatcctggatgaggagcccatcgtg
aacagagggctggctgctgccctgctcctgtgtcagaacaaaggactgctggagaccaca
gtacaaaaggtggcccgggtgaaggctcccaataagtcactgccctcagcagtgtactgc
atcgaggataagatggccattgatgacaagtacagccgacgggaggagtacaggggcttc
acccaggacttcaaggagaaagatggctacaagcctgatgttaagattgaatacgtggat
gagacgggcaggaaactgactcccaaggaggcattccggcagctgtcccaccgcttccac
ggaaagggctcaggcaagatgaagactgagcggcggatgaagaagctggatgaggaggcg
ctcctgaagaaaatgagctccagtgacacgcccctgggcaccgtggcactgctccaggag
aagcagaaggcccagaagacaccgtatatcgtgctcagtggcagtggcaagagcatgaat
gcgaacaccatcaccaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system