KEGG   Mus musculus (house mouse): 20239
Entry
20239             CDS       T01002                                 
Symbol
Atxn2, 9630045M23Rik, ATX2, Sca2
Name
(RefSeq) ataxin 2
  KO
K23625  ataxin 2/2L
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu05014  Amyotrophic lateral sclerosis
mmu05017  Spinocerebellar ataxia
mmu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    20239 (Atxn2)
   05017 Spinocerebellar ataxia
    20239 (Atxn2)
   05022 Pathways of neurodegeneration - multiple diseases
    20239 (Atxn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    20239 (Atxn2)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     20239 (Atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 20239
NCBI-ProteinID: NP_033151
MGI: 1277223
Ensembl: ENSMUSG00000042605
UniProt: O70305 E9QM77 Q3UX07
Position
5:121849794..121954372
AA seq 1136 aa
MSLKPQPQPPAPATGRKPGGGLLSSPGAAPASAAVTSASVVPAPAAPVASSSAAAGGGRP
GLGRGRNSSKGLPQPTISFDGIYANVRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPK
CDLVLDAAHEKSTESSSGPKREEIMESVLFKCSDFVVVQFKDTDSSYARRDAFTDSALSA
KVNGEHKEKDLEPWDAGELTASEELELENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSS
YTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNCSDR
EGHGPNTRDNKYIPPGQRNREVLSWGSGRQSSPRMGQPGPGSMPSRAASHTSDFNPNAGS
DQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSA
HGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSMSSGLEFVSHNPPSEAAAP
PVARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQSSIGNSPSGPVLASPQAGIIPAEAVS
MPVPAASPTPASPASNRALTPSIEAKDSRLQDQRQNSPAGSKENVKASETSPSFSKADNK
GMSPVVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLSKNREGEKSRDLIKDKTEASAK
DSFIDSSSSSSNCTSGSSKTNSPSISPSMLSNAEHKRGPEVTSQGVQTSSPACKQEKDDR
EEKKDTTEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVYT
QPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMM
HPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMM
APPAHAQPGLVSSSAAQFGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPN
AALHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAG
LAPTPPSMTPASNTQSPQSSFPAAQQTVFTIHPSHVQPAYTTPPHMAHVPQAHVQSGMVP
SHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq 3411 nt   +upstreamnt  +downstreamnt
atgtcgctgaagccgcagccgcagccgcccgcgcccgccactggccgcaagcccggcggc
ggcctgctctcgtcgcccggcgccgcgccggcctcggccgcggtgacctcggcttccgtg
gtgccggccccggccgcgccggtggcgtcttcctcggcggccgcgggcggcgggcgtccc
ggcctgggcagaggtcggaacagtagcaaaggactgcctcagcctacgatttcttttgat
ggaatctatgcaaacgtgaggatggttcatatacttacgtcagttgttggatcgaaatgt
gaagtacaagtgaaaaacggaggcatatatgaaggagtttttaaaacatacagtcctaag
tgtgacttggtacttgatgctgcacatgagaaaagtacagaatccagttcggggccaaaa
cgtgaagaaataatggagagtgttttgttcaaatgctcagacttcgttgtggtacagttt
aaagatacagactccagttatgcacggagagatgcttttactgactctgctctcagcgca
aaggtgaatggtgagcacaaggagaaggacctggagccctgggatgcaggggagctcacg
gccagcgaggagctggagctggagaatgatgtgtctaatggatgggaccccaatgacatg
tttcgatataatgaagagaattatggtgtggtgtccacatatgatagcagtttatcttca
tatacggttcctttagaaagggacaactcagaagaatttcttaaacgggaggcaagggca
aaccagttagcagaagaaattgaatccagtgctcagtacaaagctcgtgtcgcccttgag
aatgatgaccggagtgaggaagaaaaatacacagcagtccagagaaactgcagtgaccgg
gaggggcatggccccaacactagggacaataaatatattcctcctggacaaagaaacaga
gaagtcctatcctggggaagtgggagacagagctcaccacggatgggccagcctgggcca
ggctccatgccgtcaagagctgcttctcacacttcagatttcaacccgaacgctggctca
gaccaaagagtagttaatggaggtgttccctggccatcgccttgcccatctccttcctct
cgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccct
acacggccgccctccaggcccccctcgaggccctccagacccccgtctcacccctctgct
catggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaaggaccccca
aggatgtctccaaaggcacagcgccaccctcggaatcacagagtctctgctgggagaggc
tccatgtctagtggcctagaatttgtatcccacaatcccccaagtgaagcagctgctcct
ccagtggcaaggaccagtcctgcagggggaacgtggtcctcagtggtcagtggggttcca
aggttatctcccaaaactcacagacccaggtctcccaggcagagcagcattggaaactct
cccagcgggcctgtgcttgcttctccccaagctggcatcatccctgcagaagccgtttcc
atgcctgttcccgccgcatctccgactcctgccagccctgcatccaacagagcactgacc
ccatctattgaggcaaaagattccaggcttcaagatcagaggcagaactctcctgcaggg
agtaaagaaaatgttaaagcaagtgaaacatcacctagcttttcaaaagctgacaacaaa
ggtatgtcaccagttgtttctgaacacagaaaacagattgatgacttaaagaagtttaag
aatgattttaggttacagccaagctctacatctgaatctatggatcaactactaagcaaa
aatagagaaggagaaaagtcacgagatttgattaaagataaaacggaagcaagtgctaag
gatagtttcattgacagcagcagcagcagcagcaactgtaccagtggcagcagcaagacc
aacagccctagcatctccccttccatgcttagtaatgcagagcacaagagggggcctgag
gtcacatcccaaggggtgcagacttccagcccagcctgcaaacaagagaaggatgacaga
gaagagaagaaagacacaacagagcaggttaggaaatcgacattgaatcccaatgcaaag
gagttcaaccctcgttctttctctcagccaaagccttctactaccccaacgtcacctcgg
cctcaagcacaacccagcccatctatggtgggtcatcagcagccagctccagtgtacact
cagcctgtgtgcttcgcacccaatatgatgtatcccgtcccagtgagcccgggcgtacaa
cctttatacccaatacctatgacgcccatgcctgtgaaccaagccaagacatatagagca
ggtaaagtaccaaatatgccccaacagcgacaagaccaacatcatcaaagcaccatgatg
cacccagcctccgcggcagggccacccatcgtagccaccccgcccgcttactccactcag
tacgttgcctacagccctcagcagtttcccaatcagcctttggtccagcatgtgccgcat
tatcagtctcagcatcctcatgtgtacagtcctgtcatacaaggtaatgccaggatgatg
gcaccaccagcacatgctcagcctggtttagtgtcttcttcagctgctcagttcggggct
cacgagcagacgcacgccatgtatgcatgtcccaaattaccatacaacaaggagacaagc
ccttctttctactttgccatttccaccggctccctcgctcagcagtatgcacatcctaat
gccgccctgcatccacatactccccatcctcagccttcggccactcccaccggacagcag
caaagccagcatggtggaagtcaccctgcacccagtcctgttcagcaccatcagcaccag
gctgcccaggctcttcatctggccagtccacagcagcagtcggccatttatcatgcgggg
ctggcaccaacaccaccttccatgacacctgcctctaatacacagtctccacagagcagt
ttcccagcagcacaacagacagtcttcaccatccacccttctcatgttcagccggcatac
accaccccaccccacatggcccacgtacctcaggctcatgtacagtcaggaatggttcct
tctcatccaactgcccatgcgccaatgatgctaatgacgacacagccacccggcggtccc
caggccgccctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttc
ccttatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (130)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (123)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (45)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (41)   
DNA sequence (56)   
   RefSeq(nuc) (42)   
   GenBank (7)   
   EMBL (7)   
Protein domain (4)   
   Pfam (4)   
All databases (241)   

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