KEGG   Mus musculus (house mouse): 20269
Entry
20269             CDS       T01002                                 
Symbol
Scn3a, Gm1000, Nav1.3
Name
(RefSeq) sodium channel, voltage-gated, type III, alpha
  KO
K04836  voltage-gated sodium channel type III alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    20269 (Scn3a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    20269 (Scn3a)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   20269 (Scn3a)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel GPHH ATP-synt_B IQ Lustrin_cystein
Other DBs
NCBI-GeneID: 20269
NCBI-ProteinID: NP_061202
MGI: 98249
Ensembl: ENSMUSG00000057182
UniProt: A2ASI5 Q3UF73
Position
2:complement(65287462..65397935)
AA seq 1947 aa
MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKKEQDIDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYVSKKTFVVLNKGKAIFRFSATSALYILTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFEINTTSYFNGTMD
SNGTFVNVTMSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHLEGNHRPEGDRFPKSESEDSVKRRSFLFS
LDGNPLSGDKKLCSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHST
FEDSESRRDSLFVPHRPGERRNSNGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIA
SILTNTMEELEESRQKCPPCWYRFANVFLIWDCCDSWLKVKHLVNLIVMDPFVDLAITIC
IVLNTLFMAMEHYPMTEQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDG
IIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKINEDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVG
RMQKGIDYVKNKIRECFRKAFFRKPKVIEIHEGNKIDSCMSNNTGVVEISKELNYLKDGN
GTTSGVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEE
SKEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGK
GKIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNMT
TGSMFDMSEVNNFSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVKLQPVYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETD
DQSKYMTLVLSRINLVFIVLFTGEFLLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAE
LIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDP
DAIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQ
RNYRCYLLKQRLKNISNTYDKETIKGRIVLPIKGDMVIDKLNGNSTPEKTDGSSSTTSPP
SYDSVTKPDKEKFEKDKPEKESKGKEV
NT seq 5844 nt   +upstreamnt  +downstreamnt
atggcccaggcactgctggtacccccgggacctgagagcttccgccttttcactcgagaa
tctcttgctgctatcgaaaagcgtgctgcagaagagaaagccaagaaacccaagaaagaa
caagacattgacgatgagaacaagccaaagccaaacagtgacttggaagctgggaagaac
cttccatttatctatggagacattcctccagagatggtgtcggagcctctggaggacctg
gacccctactacgtcagtaagaaaacttttgtagtgttgaataaagggaaggcaattttt
cgattcagtgccacctccgccttgtatattttaactccactaaaccccgttaggaaaatt
gctattaagattttggtacactctttattcagcatgcttatcatgtgcactattttgacc
aactgtgtatttatgacattgagcaatcctcctgactggacgaagaatgtagagtacaca
ttcactgggatctatacctttgagtcacttataaagatcttggccagaggattctgctta
gaagatttcacatttcttcgtgacccatggaactggctggatttcagtgtcatcgtgatg
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacgttcagagtt
ctccgagcattgaaaacaatatcagtcattccaggtttaaagaccatcgtgggggccctg
atccagtcggtgaagaagctgtctgacgtcatgatactcactgtgttctgtctgagcgtc
tttgctctcatcgggctgcagctcttcatgggcaacctgaggaataaatgcttgcagtgg
cctccaagcgattctgcttttgagatcaacactacttcctacttcaatggcacaatggac
tcaaatgggacatttgttaatgtaacaatgagcacattcaactggaaggactatatcgca
gatgacagccacttttatgttttggatggacaaaaagatcctttactttgtggaaatggg
tccgatgcaggacaatgtccagaagggtacatctgtgtgaaggctggacgaaaccccaac
tacggttacacgagctttgacacatttagctgggccttcttatcgctgtttcgactcatg
actcaagactactgggagaacctttaccagttgacattacgtgcagctgggaaaacctac
atgatctttttcgtcctggtaattttcttgggctcattttatttggtgaacttgatcctg
gctgtggtggccatggcctatgaggaacaaaatcaggccacactggaggaggctgagcag
aaagaggcggagtttcagcagatgttggagcagttgaaaaagcagcaagaggaggctcag
gcggtggcagctgcctcagcagcgtccagagacttcagtgggataggagggttaggagaa
cttctggagagttcttcagaagcttccaagttgagctccaagagtgccaaggagtggagg
aatcggaggaagaagaggagacagagggagcacttggagggaaaccacagacccgaagga
gacaggtttcccaagtcggaatcagaagacagcgtcaagcgaaggagtttcctgttctcc
ctggatgggaacccgctgagcggcgacaagaagctgtgctctccccatcagtctctcttg
agtatccgtggctccctgttttccccaagacgcaatagcaaaacgagcattttcagcttc
agaggtcgggcgaaggacgtggggtctgagaatgactttgcggatgatgaacacagcacc
tttgaagatagcgagagcaggagagactcactgtttgtgccgcacagacctggagagcga
cgcaacagtaacggtaccaccactgaaacagaagtcaggaagagaaggctaagttcttac
cagatctcgatggaaatgctggaggattcctctgggagacaaagagccatgagcatagcc
agtatcctgaccaacacgatggaggaacttgaagaatctagacagaagtgtccaccatgc
tggtatagatttgccaatgtgtttttgatctgggactgttgtgattcatggttgaaagta
aagcatcttgtgaatttgattgtgatggatccatttgttgacctggccatcaccatctgc
atcgtgttaaacacactgttcatggccatggagcactacccgatgacggagcagttcagc
agtgtgctgacggtgggaaacctggtcttcaccgggatcttcacagccgagatggtcctg
aaaatcatcgcaatggatccctattactatttccaagagggctggaatatctttgatgga
attattgttagcctgagtttaatggagcttggcctggcaaacgtggaggggctgtccgtg
cttcggtccttcagactgctgcgagtcttcaagttggcaaaatcctggcccacactgaat
atgctcattaagatcatcggcaactcggtgggcgcactgggcaacctgaccctggtgctg
gccatcatcgtcttcatttttgccgtggtcggcatgcagctgtttggaaagagctacaag
gagtgtgtttgcaagatcaatgaggactgcaagctcccgcgctggcacatgaacgacttc
ttccactccttcctgatagtgttccgcgtgctgtgtggggagtggatagagaccatgtgg
gactgcatggaggtcgcgggccagaccatgtgccttattgtgtttatgttggtcatggtg
attgggaaccttgtggttctgaacctcttcctggccttattgttgagttcctttagttca
gacaaccttgctgctacggacgatgataacgaaatgaacaacctccagatcgcggtggga
aggatgcaaaaggggattgattatgtgaaaaataagatacgggagtgcttccgaaaagcg
ttttttagaaagccgaaagtgatagaaatccacgaagggaacaaaatagacagctgcatg
tccaataacacgggcgtagttgaaataagcaaagagcttaactaccttaaagacggtaac
ggaaccaccagtggcgtgggtactggaagcagtgtggagaaatacgtaattgatgaaaat
gactacatgtcattcatcaacaaccccagcctcaccgtgacggtgccaattgccgtggga
gagtctgactttgaaaatttaaacacggaagagtttagcagtgagtcagaactggaagaa
agcaaggagaaattaaatgcaaccagctcttctgaaggaagcacagttgacgttgctccg
ccccgagaaggtgaacaagctgaaattgaacctgaggaggaccttaagccagaagcttgc
tttactgaaggatgcattaaaaaatttcccttctgccaagtaagtacggaagaaggtaaa
ggaaaaatctggtggaatcttaggaagacctgctatagcattgtggaacacaactggttt
gagacgttcattgtgttcatgattctcctcagtagtggtgctttggcctttgaagatata
tacattgagcaacggaagaccatcaaaaccatgctggagtatgctgacaaagtcttcact
tacatcttcatcctggaaatgctcctcaaatgggtggcctatggatttcaaacctatttc
accaatgcctggtgctggttggacttcttgattgttgatgtttctttggttagcctggtg
gccaacgctcttggctattcagaacttggtgccatcaaatccctacggaccctgagagct
ctgaggccgctccgagccttatcccgctttgaaggcatgagggtggttgtgaacgctctt
gttggtgcaatcccctccatcatgaatgtgctactggtgtgcctcatcttctggttaatc
tttagtatcatgggtgtgaatctgtttgctggaaagttctatcactgtgttaacatgaca
acgggcagcatgttcgacatgagtgaagtcaacaatttcagcgactgtcaggctcttggc
aagcaagcccgatggaagaatgtgaaagtcaactttgacaatgttggggctggctacctg
gcattgctgcaagtggccacattcaaaggctggatggatattatgtatgcagctgtggat
tcacgggacgtcaaactgcagcctgtatatgaagaaaatctgtacatgtatctgtacttt
gtcatcttcatcatctttgggtcgttcttcactctaaatctattcatcggcgtcatcata
gacaacttcaaccagcagaagaagaagtttggaggtcaagacatctttatgacagaagag
cagaaaaagtactacaatgcaatgaagaaacttggctccaaaaaacctcagaagcccatc
cctcgacctgcaaacaaatttcaaggaatggtctttgactttgtaaccagacaagtgttt
gacatcagcatcatgatcctcatctgcctcaacatggtgaccatgatggtggaaacggac
gaccagagcaaatacatgaccctggttttgtcccgaatcaacctggtattcatcgtcctc
ttcactggggagtttctgctgaagctcatctctctcagatactactacttcacgattggc
tggaacatctttgactttgtggtggtgattctctcaattgtaggaatgttccttgctgag
ctgatagagaagtattttgtgtctcctaccctgttccgagtcatccgcctggccaggatt
ggacgaatcctacgcctgatcaaaggcgccaaggggatccgcacgctgctctttgctctg
atgatgtcccttcctgcgctgttcaacatcggcctcctgcttttcctcgtcatgttcatc
tacgccatctttgggatgtccaactttgcctatgttaaaaaagaggctggaattgatgac
atgttcaactttgagacttttggcaacagcatgatctgcctgttccaaatcaccacctct
gcgggctgggatggactgttggcccccatcctcaacagtgcacctcctgactgtgaccct
gatgcaattcaccctggaagctcagtgaagggagactgtgggaacccatctgtggggatt
ttcttttttgtcagctacatcatcatatccttcctggttgtggtgaacatgtacattgct
gtcatcctggagaacttcagcgttgccacagaagaaagtgcagagcccctgagtgaggac
gactttgagatgttctacgaggtctgggagaagttcgaccctgacgccacccagttcata
gagttctgcaagctctctgactttgcagctgccctggatcctcccctcctcatcgcaaag
ccaaacaaagtccagctcattgccatggacctgcccatggtgagtggagaccgcatccac
tgcctggacatcttatttgcttttacaaagcgggtcctgggtgagagtggagagatggat
gcccttcgaatccagatggaagatcggttcatggcttccaatccctccaaggtctcttat
gagcccattaccaccactctgaagcgcaaacaagaggaggtgtctgctgctatcattcag
cgtaattacagatgttatcttttaaagcaaaggttaaaaaacatatcaaatacgtatgac
aaagagacaatcaaggggaggattgtcttgcctataaaaggagatatggttattgacaaa
ttaaatgggaattccaccccagaaaagacagatgggagttcctctaccacctctcctcct
tcctatgacagtgtaacaaaaccagataaggaaaagtttgagaaagacaaaccagaaaaa
gaaagcaaagggaaagaggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (39)   
   RefSeq(nuc) (9)   
   GenBank (15)   
   EMBL (15)   
Protein domain (8)   
   Pfam (8)   
All databases (88)   

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