KEGG   Mus musculus (house mouse): 20274
Entry
20274             CDS       T01002                                 
Symbol
Scn9a, Nav1.7, PN1, mKIAA4197
Name
(RefSeq) sodium channel, voltage-gated, type IX, alpha
  KO
K04841  voltage-gated sodium channel type IX alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    20274 (Scn9a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    20274 (Scn9a)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   20274 (Scn9a)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ Lustrin_cystein
Other DBs
NCBI-GeneID: 20274
NCBI-ProteinID: NP_001277603
MGI: 107636
Ensembl: ENSMUSG00000075316
UniProt: Q62205
Position
2:complement(66310424..66465456)
AA seq 1984 aa
MAMLPPPGPQSFVHFTKQSLALIEQRISEEKAKGHKDEKKDDEEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKDLEQNETLESIMSTAESEEELK
RYFYYLEGSKDALLCGFSTDSGQCPEGYECVTAGRNPDYGYTSFDTFGWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLDRLKKEQEEAEAIAAAAAEYTSLGRSRIMGLSESSSETSRLSSKSAKERRNRR
KKKKQKLSSGEEKGDDEKLSKSGSEESIRKKSFHLGVEGHHRAREKRLSTPNQSPLSIRG
SLFSARRSSRTSLFSFKGRGRDLGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPVLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTT
NQMRKKRLSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLAVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINE
NCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKQTLREFILKSFSKKPKGS
KDTKRTADPNNKRENYISNRTLAEISKDHNFLKEKDKISGFSSSLDKSFMDENDYQSFIH
NPSLTVTVPIAPGESDLENMNTEELSSDSDSDYSKERRNRSSSSECSTVDNPLPGEEEAE
AEPINADEPEACFTDGCVRRFPCCQVNIDSGKGKVWWTIRKTCYRIVEHSWFESFIVLMI
LLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWLD
FLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGSRFSVSQVANRSECFALMNVSGNVRW
KNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNAQPIYEYNLYMYIYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGN
KFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQTDYMSFVLYWINVVFIILFTGEC
VLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFE
TFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVS
YIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCKL
SDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQ
MEERFMSANPSKVSYEPITTTLKRKQEDVSATIIQRAYRRYRLRQNVKNISSIYIKDGDR
DDDLPNKEDIVFDNVNENSSPEKTDATASTISPPSYDSVTKPDQEKYETDKTEKEDKEKD
ESRK
NT seq 5955 nt   +upstreamnt  +downstreamnt
atggcgatgttgcctccgccaggacctcagagcttcgttcacttcacaaaacagtccctt
gccctcattgaacaacgcatttctgaagaaaaagccaagggacacaaagatgaaaagaaa
gatgatgaggaagaaggtcccaagcccagtagtgacttggaagcaggtaaacagctaccc
ttcatctacggagacattcccccgggaatggtgtcagagcccctggaggacctggaccca
tactatgcagacaaaaaaacttttatagtattgaacaaagggaaagcaatcttccgtttc
aacgccacccctgctttgtacatgctgtctcccttcagtcctctcagaagaatatctatt
aagattttagtgcactccttattcagcatgctaatcatgtgcacaattctgacaaactgc
atattcatgaccatgagcaaccctccagattggaccaaaaacgtagagtacacttttact
gggatatatacttttgaatcactcataaaaatccttgcaagaggcttttgcgtgggcgaa
ttcaccttcctccgtgacccttggaactggctggactttgttgtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaattccaggactaaaaaccatcgtgggggccctgatccaa
tcagtgaagaagctctctgacgtcatgatcctcactgtgttctgtctcagtgtgttcgca
ctaattggactacaactgtttatgggcaacttgaagcataaatgtttccggaaggacctt
gagcagaatgaaacattagaaagcatcatgagtactgctgagagtgaagaagaattgaaa
agatatttttattacttggagggatccaaagatgctcttctttgcggtttcagcacagat
tcagggcagtgtcctgaagggtacgagtgtgtgacagctggcagaaacccagattatggc
tacacaagctttgacacgttcggctgggccttcttggccttgtttcggctaatgactcag
gactactgggagaacctttatcaacagacactgcgtgctgctggcaaaacctacatgatt
ttctttgtcgtggtgatatttctgggatccttttacctgataaacttgatcctggctgtg
gtagccatggcgtacgaggaacagaaccaggccaacatcgaagaagctaaacagaaagag
ttagaatttcagcagatgttagaccgactcaaaaaagagcaggaagaagccgaggcgatc
gctgcagccgctgctgagtacacgagtttagggcggagcaggattatgggactctctgag
agctcttcagaaacctccaggctgagctcaaagagtgccaaggagagaagaaaccgaaga
aagaaaaaaaaacagaagctgtccagtggcgaggaaaagggtgatgatgagaagctgtcc
aagtcagggtcagaggaaagcatccgaaagaaaagcttccatctcggcgtggaagggcac
caccgggccagggaaaagaggctgtccacccccaaccagtcaccactcagcattcgtggg
tccttgttttctgccaggcgcagcagcagaacaagtctcttcagttttaaggggcgagga
agagatctgggatctgaaacggaatttgctgatgatgagcatagcatttttggagacaac
gagagcagaaggggttcactatttgtaccccatagaccccgggagcggcgcagcagtaac
atcagccaggccagtaggtccccaccagtgctgccggtgaacgggaagatgcacagtgca
gtggactgcaatggcgtggtgtcgcttgttgatggaccctcagccctcatgctccccaat
ggacagcttcttccagaggtgataatagataaggcaacttccgacgacagcggcacaact
aatcagatgcgtaaaaaaaggctctctagttcttactttttgtctgaggacatgctgaat
gacccacatctcaggcaaagggccatgagcagagcaagcattctaaccaacacagtagaa
gaacttgaagaatctagacaaaaatgtccaccatggtggtacagatttgctcacacattt
ttaatctggaattgttctccatattggataaaattcaaaaagttcatctattttattgta
atggatccttttgtagatcttgcaattaccatttgcatagttttaaacaccttgtttatg
gctatggagcaccatccaatgacggatgaattcaaaaatgtacttgcagtcgggaacctg
gtcttcacagggatcttcgcagctgaaatggtactgaagttaatagccatggatccctat
gaatatttccaagtagggtggaatatttttgacagcctgattgtgacgttgagtttggtg
gagcttttcctagcagatgtggaaggattatcagtcctgcggtcctttagattgctgcga
gtcttcaagttggcaaaatcctggcccacactgaatatgctcattaagatcatcggcaac
tcggtgggcgcactgggcaacctgaccctggtgctggccatcatcgtcttcatttttgcc
gtggtcggcatgcagctgtttggaaagagctacaaggagtgtgtttgcaagatcaacgag
aactgcaagctcccacgctggcacatgaacgacttcttccactccttcctgatcgtgttc
cgtgtgctgtgtggggagtggatagagaccatgtgggactgcatggaggttgcgggccag
accatgtgccttattgtttacatgatggtcatggtgattgggaaccttgtggtcctgaac
ctgtttctggctttattactgagttcctttagttctgacaatcttacagcaattgaagaa
gacaccgacgcaaacaacctccagattgcagtggccagaattaaaagagggatcaattat
gtgaaacagaccctgcgtgaattcattctaaagtcattttccaaaaagccaaagggctcc
aaggacacaaaacgaacagcggatcccaacaacaaaagagaaaactatatctcaaaccgt
acccttgcggagataagcaaagatcacaatttcctcaaagaaaaggataagatcagtggt
tttagcagcagtctagacaaaagctttatggatgaaaacgattaccagtcctttattcat
aatcccagcctcacagtgacagtgcccattgcacctggggagtctgatttggagaatatg
aacacagaagagcttagcagtgactcagatagtgactacagcaaagagagacggaaccga
tcaagttcttcagagtgcagcacagttgataaccctctgccaggagaagaggaggcagaa
gctgagcctatcaatgcagatgagcccgaagcctgttttacagatggctgtgtgaggaga
tttccatgctgccaagttaacatagactccgggaaagggaaagtttggtggaccatccgg
aagacctgctacaggatagtggagcacagctggtttgaaagcttcattgttctcatgatc
ctgctcagcagtggagctctggcttttgaggatatatatattgaaaagaaaaagaccatt
aagattatcctggagtatgctgacaagatattcacctacatcttcattctggaaatgctt
ctaaaatgggtggcatacgggtataaaacatatttcactaatgcctggtgttggctggac
ttcttaattgttgatgtgtctctagttactttagtagccaacactcttggctactcagac
cttggccccattaaatctctacggacactgagggccctaagacccctaagagctttgtct
agatttgaaggaatgagggtagtggtcaacgcactcataggagcaatcccttccatcatg
aatgtgcttcttgtgtgccttatattctggctaatatttagcatcatgggagtcaatctg
tttgctggcaagttctatgagtgtgttaacaccacagatggctcacgattttctgtatct
caagttgcaaaccgttctgagtgttttgccctgatgaatgttagtggaaatgtgcgatgg
aaaaacctgaaagtaaacttcgataacgttggacttggttacctgtcgctgcttcaagtt
gcaacgttcaagggctggatggatattatgtatgcagcagttgactctgttaatgtaaat
gcacaaccaatatatgaatacaacctctacatgtacatttattttgtcatcttcatcatc
tttggctcattcttcactttgaacttgttcattggtgtcatcatcgataatttcaaccaa
cagaagaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatactat
aatgcaatgaagaagctggggtccaagaaaccacaaaaaccaattccgaggccagggaac
aaattccaaggatgcatatttgacttagtgacaaaccaagcttttgatatcaccatcatg
gttcttatctgcctcaatatggtaaccatgatggtagaaaaagaggggcaaactgactac
atgagttttgtgctatactggatcaacgtggtcttcatcatcctgttcactggggagtgt
gtgctgaagctgatctctctcaggcattactacttcactgtgggatggaacatttttgat
tttgtggtagtgatcctctccattgtaggaatgtttctcgctgagatgatagagaagtat
ttcgtgtctcctaccctgttccgagtcattcgcctggccaggattggacgaatcctacgc
ctgatcaaaggcgccaaggggatccgcacgctgctctttgctctgatgatgtcccttcct
gcgctgttcaacatcggcctcctgcttttcctcgtcatgttcatctacgccatctttggg
atgtccaactttgcctacgttaaaaaggaagctggaattaatgacatgttcaactttgag
accttcggcaacagcatgatctgcctgttccaaatcaccacctctgcgggctgggatgga
ctgctggcccccatcctcaacagtgcacctcctgactgtgacccaaaaaaggttcaccca
ggaagttcagtggaaggggactgtggaaatccatctgtgggaattttctactttgtcagc
tacatcatcatatccttcctggttgtggtgaacatgtacattgctgtcatcctggagaac
ttcagcgttgccacagaagaaagtactgagcccctgagtgaggacgactttgagatgttc
tacgaagtctgggagaagttcgaccctgacgccacccagttcatagagttctgcaagctc
tctgactttgcagcagccctggatcctcccctcctcatcgcaaagccaaacaaagtccag
ctcattgccatggacctgcccatggtgagtggagaccgcatccactgcctggacatctta
tttgcttttacaaagcgggtcctgggcgagagcggagagatggattcccttcgttcacag
atggaagaaaggtttatgtcagccaatccttctaaagtgtcctatgagcccatcacaacc
acactgaagcgaaaacaagaggatgtatctgcgactatcattcagcgtgcttacagacgg
taccgccttaggcaaaacgtcaagaatatatcaagtatatatataaaagatggagacaga
gatgacgatttgcccaataaagaagatatagtttttgataatgttaacgagaactcaagt
ccagaaaagacagatgcaacagcctctaccatctctccaccttcctatgacagtgtcaca
aagccagatcaagagaaatatgaaacagacaaaacggagaaggaagacaaagagaaagac
gaaagcaggaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (31)   
   RefSeq(nuc) (7)   
   GenBank (12)   
   EMBL (12)   
Protein domain (7)   
   Pfam (7)   
All databases (75)   

Download RDF
DBGET integrated database retrieval system