KEGG   Mus musculus (house mouse): 20350
Entry
20350             CDS       T01002                                 
Symbol
Sema3f, Sema4, Semak
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
  KO
K06840  semaphorin 3
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    20350 (Sema3f)
SSDB
Motif
Pfam: Sema Ig_3 PSI I-set ig Ig_2 Ig_6 VP4_haemagglut V-set
Other DBs
NCBI-GeneID: 20350
NCBI-ProteinID: NP_001298080
MGI: 1096347
Ensembl: ENSMUSG00000034684
UniProt: O88632
Position
9:complement(107558698..107587674)
AA seq 785 aa
MLVTAFILWASLLTGAWPATPIQDQLPATPRVRLSFKELKATGTAHFFNFLLNTTDYRIL
LKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECILSGKDGNGECGNFVR
LIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQALPWTQMQVVRGRGSRATDGADRPTPTA
PRQDYIFYLEPEKLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQ
TAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQNPAVYARIGRIC
LNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTQDVRNPVIYAVFT
SSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPS
MKSTKDYPDEVINFMRTHPLMYQAVYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEV
LFLGTDRGTVQKVIVLPKDDQEVEELMLEEVEVFKEPAPVKTMTISSKRQQLYVASAVGV
THLSLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRG
FNSNANKNAVESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPSDRRREIRAEDRFLRTE
QGLLLRALQLGDRGLYSCTATENNFKHIVTRVQLHVLGRDAVHAALFPPLAVSVPPPPGT
GPPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPRPREAPGALRPPELQDQKKPRNRRH
HPPDT
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgcttgtcactgccttcatcctctgggcttccctgctgaccggggcctggcctgctacc
cctatccaggaccagcttccagccacacctagagtccgactgtcattcaaagaacttaag
gccaccggtaccgcccacttcttcaactttctgctcaacactacagactacagaatcctg
ctcaaggatgaggaccatgaccgcatgtatgtgggcagcaaggactacgtgctgtccctg
gacctgcatgacatcaaccgagagccccttattatccattgggcagcctccccgcagcgc
attgaggagtgcatactgtcaggcaaggatggcaatggagagtgtggtaacttcgtccgg
ctcatccagccttggaaccgaacacacctgtatgtgtgtgggaccggtgcctacaacccc
atgtgcacctatgtgaaccgtggccgtcgcgcacaggccctaccgtggacccagatgcag
gtggtcagaggccgaggcagcagggccaccgatggtgccgaccgcccgacgcccacagcc
ccacgccaggattacatcttctacctggagcctgagaaactggagtcaggaaaaggcaaa
tgtccctatgaccccaagctggacacagcctcagccctcatcaatgaggaactctatgca
ggagtgtacatcgattttatgggtaccgatgcagccattttccgcacgctggggaagcag
acagccatgcgcacagatcagtacaactcccggtggctcaatgatccttccttcatacat
gctgagctcatccctgacagtgcagagcgcaatgacgataaactctacttcttcttccga
gagcgctcggcagaggcgccacagaaccctgctgtgtatgcccgcatcgggcgcatctgc
ctcaacgatgacggtggccattgctgcctggtcaacaagtggagcacattcctgaaggct
cggctcgtctgctccgtgccaggcgaggatggtattgagacccacttcgacgaactccag
gatgtgtttgtccagcagacccaggacgtcaggaacccagtcatttatgctgtctttacc
tcttcaggctctgtgttccgagggtctgcagtgtgtgtctactccatggctgatatccgc
atggtcttcaatgggccttttgctcacaaggagggccccaactatcaatggatgcccttc
tcaggaaagatgccctatcctcggcctggcacatgccctggtggaaccttcacgccctcg
atgaagtccactaaggactaccctgatgaagtgatcaacttcatgcgcactcatccgctc
atgtaccaggccgtctacccgctccagcggcgacccctggtggtccgtacaggcgctccc
taccgcctcaccactgtcgctgtggaccaggtggatgcagctgatggacgctatgaggtg
cttttcctgggcacagaccgcgggacagtgcagaaggtcatcgtgctgcccaaggacgac
caggaggtggaagagctgatgctagaggaagtggaggtcttcaaggaaccagcacctgtt
aagaccatgaccatctcttccaagaggcaacaactgtatgtggcctcagccgtgggtgtc
acacacctgagcctgcaccgctgccaggcctatggagctgcctgtgccgactgctgcctt
gcccgcgatccctactgtgcctgggatggccaggcctgctctcgctacacagcatcctcc
aagaggcggagtcgccggcaagatgtccgccacgggaaccctatcagacagtgccgtggt
ttcaattccaatgcaaacaagaatgccgtagagtctgtgcagtacggagtggccggcagc
gcagctttccttgagtgtcagccccgctcacctcaagccactgtcaagtggctgttccag
cgagatcccagtgatcggcgccgtgagattcgcgcagaggaccgcttcctgcgtacagag
caggggctgttgcttcgcgccctgcagcttggtgaccgcggcctctactcctgcacggcc
actgagaacaacttcaagcacatcgtcacgcgggtgcagctgcatgtactgggccgggat
gccgtccatgctgccctcttccccccactggctgtgagcgtccctccacctcctggcaca
ggccctccaacgcctccttaccaggagctggcccagctcctagcccagccggaagtgggc
ctcatccatcagtactgccagggttactggcgccacgtgccccccagacccagggaggcg
ccaggagcacttaggcctcctgaactccaggaccagaaaaagccgaggaaccgccgccac
caccctccggacacatga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (27)   
   RefSeq(nuc) (11)   
   GenBank (8)   
   EMBL (8)   
Protein domain (9)   
   Pfam (9)   
All databases (63)   

Download RDF
DBGET integrated database retrieval system