KEGG   Mus musculus (house mouse): 20357
Entry
20357             CDS       T01002                                 
Symbol
Sema5b, SemG, Semag, mKIAA1445
Name
(RefSeq) sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
  KO
K06841  semaphorin 5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    20357 (Sema5b)
SSDB
Motif
Pfam: Sema TSP_1 TSP1_spondin PSI TSP1_ADAMTS TSP1_CCN
Other DBs
NCBI-GeneID: 20357
NCBI-ProteinID: NP_038689
MGI: 107555
Ensembl: ENSMUSG00000052133
UniProt: Q60519
Position
16:35361517..35485103
AA seq 1093 aa
MVVPGPLALSLLLSSLTLLVSHLSSSQDIASESSSEQQMCTRREHPIVAFEDLKPWVFNF
TYPGVRDFSQLALDPSRNQLIVGARNYLFRLSLANVSLLQATEWASSEDTRRSCQSKGKT
EEECQNYVRVLIVSGRKVFMCGTNAFSPVCSSRQVGNLSRTIEKINGVARCPYDPRHNST
AVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAY
FFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNE
LQSAFHLPEQDLIYGVFTTNVNSIAASAVCAFNLSAISKAFNGPFRYQENPRAAWLPIAN
PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSVRFSHLVVDL
VQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLEELHVLPPGRLEPLRSLRILHSAR
ALFVGLSDRVLRVPLERCSAYHSQGACLGARDPYCGWDGKRQLCSTLEDSSNMSLWIQNI
TTCPVRNVTRDGGFGPWSPWKPCEHLDGDNSGSCLCRARSCDSPRPRCGGLECLGPSIHI
ANCSRNGAWTAWSSWAQCSTSCGIGFQVRQRSCSNPAPRHGGRICVGKSREERFCNENTP
CPVPIFWASWGSWSKCSNNCGGGVQSRRRSCENGNSCPGCGVEFKTCNPEACPEVRRNTP
WTPWLPVNVTQGGARQEQRFRFTCRAPLPDPHGLQFGKRRTETRTCPADGTGACDTDALV
EDLLRSGSTSPHTLNGGWATWGPWSSCSRDCELGFRVRKRTCTNPEPRNGGLPCVGDAAE
YQDCNPQACPVRGAWSCWTAWSQCSASCGGGHYQRTRSCTSPAPSPGEDICLGLHTEEAL
CSTQACPEGWSLWSEWGVCTEDGAQSRSRSCEELLPGPGACVGNSSQSRPCPYSEIPVIL
PASSVEETTSCGGFNLIHLIVTGVSCFLVSGLLTLAVYLSCQHCQRQSQESTLVHPATPN
HLHYKGGGTPKNEKYTPMEFKTLNKNNLIPDDRANFYPLQQTNVYTTTYYPSPLNKPSFR
PEASPGQRCFPNS
NT seq 3282 nt   +upstreamnt  +downstreamnt
atggtagtcccaggacccctggctctctcgctgttgctgtccagcctcaccctgctggtg
tcccacctctccagctcccaggacattgccagtgagtccagcagtgagcaacagatgtgc
acgcggagggagcaccccatcgtggcctttgaagatctgaagccgtgggtctttaacttc
acctaccctggagtccgggatttctcccagcttgctcttgatccctcgaggaatcagctc
atcgtgggagccaggaactacctcttcagactcagcctcgccaatgtctccctccttcag
gctacagagtgggcctccagtgaggacacgcgccgctcctgccagagcaaagggaaaacg
gaggaggagtgtcagaactatgtacgagtcctgattgtttccggccggaaggtgttcatg
tgcggtaccaatgccttttccccagtgtgctccagcagacaggtagggaacctcagccgg
actattgagaagatcaacggtgtggcccggtgcccctatgacccacgccacaactctaca
gccgtcatctcctctcagggggagctctatgcagccacagtcattgacttctccggtcgg
gacccagccatctaccgcagcctgggcagtgggccaccgcttcgcactgcccagtataac
tccaaatggctcaatgagccaaattttgtggcagcctttgacatcgggctgtttgcgtat
ttcttccttcgggagaatgccgtggagcatgattgtgggcgcactgtgtactctcgggtg
gcccgggtgtgcaagaatgatgtaggtggccgtttcctgctggaggacacgtggaccaca
ttcatgaaggcccggctcaactgctcccgcccgggagaggtccccttctactataatgag
ctgcagagtgccttccatctgcccgagcaggacctcatctatggcgtcttcaccactaac
gtaaacagcattgcggcttctgctgtctgcgccttcaacctcagtgccatctccaaggct
ttcaatggcccatttcgttaccaggaaaaccccagggctgcctggctcccaatcgccaat
cccatccccaatttccagtgtggcactctgccggagactggccccaacgagaacctcacg
gagcgcagcctgcaggacgcacagcggctcttcctgatgagcgaagctgtgcagccagtg
acaccagagccctgtgtcacccaggacagcgtccgcttctcacatctcgtggtagacctt
gtgcaagctaaggacacgctctatcacgtactctacataggcacggagtcgggtaccatc
ctgaaagcgctgtccacggccagccgcagcctccgtggctgctacctggaggagctacat
gtgctgcctcctgggcgccttgaacctctgcggagcctgcgcatcctgcacagcgcgcgt
gcgctcttcgtgggattgagcgacagggtgctgcgggtcccactggagaggtgttcggcc
tatcatagccagggggcatgcctgggagcacgggacccatactgcggctgggatgggaag
cggcaactttgcagcacgcttgaagacagttccaacatgagcctgtggatccagaacatc
acaacctgtcctgtacgaaatgtgacacgggatgggggcttcggcccatggtcaccatgg
aaaccgtgtgagcacttagatggagacaactcgggttcttgcctgtgccgggccagatcc
tgtgactccccaaggcctcgctgtgggggcctcgagtgcctggggccatccatccatatt
gccaattgctccaggaatggggcgtggaccgcatggtcatcgtgggctcagtgcagcacg
tcctgtgggatcggcttccaggtccgtcagcgaagttgcagcaacccggcgccccgccat
gggggccgcatttgcgtgggcaagagccgggaggagcggttctgtaatgaaaatacacct
tgcccagtgcccatcttctgggcttcctggggttcctggagcaagtgcagcaacaactgt
ggaggcggcgtgcagtcgcgacgccgttcttgcgagaatggcaactcgtgcccgggttgc
ggcgtggagttcaagacctgcaaccccgaggcttgcccggaagtgcgacgcaacacaccc
tggacgccctggctgcccgtgaacgtgacccagggtggagcgcgccaggagcagcgattc
cgcttcacctgccgcgcgccgctgccggacccgcacggtctgcagttcggcaagaggagg
acagagaccaggacttgcccggcagacggcaccggagcctgcgacaccgacgccctggtg
gaggatctcctgcgcagcgggagcacgtcaccacacactctgaacggaggctgggccacc
tggggcccgtggtcatcctgctcccgggactgcgagctgggcttccgcgtccgcaagaga
acttgtaccaacccggagcctcgcaacgggggcttgccctgcgtgggagacgctgcggag
taccaagactgcaacccacaggcttgcccagtgcggggtgcttggtcctgctggaccgca
tggtcccagtgctcagcatcctgcggtggtggccactatcaacgcacccgttcctgcacc
agccccgccccatccccaggtgaggacatctgcctcggcctgcacacggaggaggcccta
tgttcaacacaggcctgcccagaaggctggtcactgtggtctgagtggggtgtctgcact
gaggatggggcccagagccggagccggagctgtgaggagcttctcccaggaccaggtgcc
tgtgttggcaacagcagccagagccggccctgcccctacagtgagattcctgtcatccta
cctgcttccagtgtggaggagaccaccagctgtggagggttcaatctcatccacctgata
gtcactggtgtgtcctgcttcctggtttctgggctcttgaccttggcagtgtacctgtct
tgccagcactgccagcgccagtctcaggagtccacgcttgtccatcctgccacacctaac
cacttgcactacaagggtgggggcacccccaagaatgagaagtacacccctatggaattc
aagacactgaacaagaacaacttaatccctgatgacagagccaacttctacccactgcag
cagaccaatgtgtatacaaccacgtactaccccagcccactgaacaagcccagcttccgg
cctgaggcctcacctggacagcgctgtttccccaacagctga

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (17)   
   RefSeq(nuc) (7)   
   GenBank (5)   
   EMBL (5)   
Protein domain (6)   
   Pfam (6)   
All databases (74)   

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