KEGG   Mus musculus (house mouse): 20480
Entry
20480             CDS       T01002                                 
Symbol
Clpb, Skd3
Name
(RefSeq) ClpB caseinolytic peptidase B
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04213  Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    20480 (Clpb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:mmu03110]
    20480 (Clpb)
Chaperones and folding catalysts [BR:mmu03110]
 Heat shock proteins
  HSP100
   20480 (Clpb)
SSDB
Motif
Pfam: AAA_2 Ank Ank_2 Ank_5 Ank_3 Ank_4 ClpB_D2-small AAA_5 AAA Zeta_toxin Sigma54_activat AAA_22 AAA_24 Torsin nSTAND3 AAA_3 ABC_tran AAA_16 AAA_14 ATPase_2 YchF-GTPase_C RP853
Other DBs
NCBI-GeneID: 20480
NCBI-ProteinID: NP_033217
MGI: 1100517
Ensembl: ENSMUSG00000001829
UniProt: Q60649 Q3URM1
Position
7:101312958..101444667
AA seq 677 aa
MMLSAVLRRTTPAPRLFLGLIKSPSLQSRGGAYGRGVVTGDRGEPQRLRAAAWVRPGASS
TFVPGRGAATWGRRGERTEIPYLTAASSERGPSPEETLPGQDSWNGVPNKTGLGMWALAM
ALVVQCYSKNPSNKDAALMEAARANNVQEVRRLLSEGADVNARHKLGWTALMVASISHNE
SVVQVLLAAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTAL
HYAVLADDYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKRE
AEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTEL
AKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAV
VLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLR
QEALEMSRNRIAENLGDVQMSDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLP
FCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRV
VNQLAAAYEQDLLPGGCTLRITVEDSDKHLLKSPELPSPQAEKRPPTLRLEIIDKDSKTR
KLDIQAPLHPEKVCYTI
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgatgttgtccgcggtgttgaggagaaccacgccagcgcctcggctcttcctagggtta
atcaaatctccatctctccaaagccggggaggtgcttacggccgtggcgttgtcaccgga
gaccgcggggagccgcagcggttgagagctgccgcttgggtgcgccctggagcatcttct
accttcgtccccggacggggggcagccacctgggggcgccgtggagaacgcaccgagatc
ccatacctgactgccgcctcgtcggaacgcggtcctagccccgaagaaacactcccggga
caagacagctggaatggggtccccaacaagacgggtctgggcatgtgggccttggccatg
gcgctggtggttcagtgctacagcaagaatccatccaacaaggatgcagctctaatggaa
gctgcccgggccaataacgtgcaggaagtcagaaggctgttatcagaaggtgcagatgtc
aatgcaagacacaaacttggctggacagcactgatggtggcatccatcagccacaatgag
agtgtggtgcaggtcctgcttgctgctggagctgacccaaaccttggggatgagttcagc
agtgtctacaagactgccaatgaacagggagtccattctctggaagtcctagtcactcga
gaggatgacttcaacaaccggctaaatcaccgtgctagcttcaaaggctgcacagccctg
cactatgctgtcctggccgatgactacagcatcgtcaaggagctgctggacagaggagcc
aacccccttcagaggaatgagatgggacacacacccctggattatgcccgggaaggggag
gttatgaagcttctgaaaacttctgagaccaagtacatggagaagcagaggaagcgggag
gcagaggagcggcgccgcttcccactggagcagcgactgaaggagcacatcattggccag
gagagtgccatcgccaccgtcggtgctgcgatccggaggaaggagaacggctggtacgat
gaggagcaccctctagtcttcctcttcttgggatcgtctggaatagggaaaaccgagctg
gccaagcagacagcaaagtatatgcacaaagatgccaaaaagggcttcatccggctcgac
atgtctgagttccaggagcgacatgaggtagccaagtttatcggttctccaccaggctac
atcggccatgaagagggtggccagctgaccaagaaactgaaacagtgcccaaatgcagta
gtcctctttgatgaggtggacaaggcccatccagatgtgctcaccatcatgctgcagctg
tttgatgagggccgcctgacagatggcaaagggaagaccattgactgcaaggatgccatc
ttcatcatgacttccaatgtagccagtgatgagatcgcccagcatgcattgcagctcaga
caggaagctttggagatgagccgaaatcgaatcgctgaaaaccttggggatgtccagatg
agtgacaagatcaccatctccaagaactttaaagagaatgtgatccgacccatcttgaaa
gctcacttccggagagacgagtttctgggacggatcaatgagatcgtctacttcctccct
ttctgccactcagagctcatccagctggtcaacaaggaactgaacttctgggccaagaga
gccaagcagaggcacaacatcacactactgtgggaccgcgaggtggcagatgtgttggtt
gatggctacaacgtccactatggtgcccgctccattaagcatgaggtagagcggcgtgtg
gtaaaccaactggcggcagcctatgagcaggacctgctaccagggggttgcaccctgcgt
atcactgtggaggattcggacaagcacctcctcaagagccctgagctgccctcaccccag
gctgagaagcgtccacctacattgcgactggagatcattgataaggacagcaagacccgc
aaactggacatccaggcaccactccaccctgagaaggtgtgctacaccatctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (53)   
   RefSeq(nuc) (9)   
   GenBank (22)   
   EMBL (22)   
Protein domain (22)   
   Pfam (22)   
All databases (109)   

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