KEGG   Mus musculus (house mouse): 20513
Entry
20513             CDS       T01002                                 
Symbol
Slc1a6, EAAT4
Name
(RefSeq) solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
  KO
K05617  solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04721  Synaptic vesicle cycle
mmu04724  Glutamatergic synapse
mmu05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    20513 (Slc1a6)
   04721 Synaptic vesicle cycle
    20513 (Slc1a6)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    20513 (Slc1a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mmu02000]
    20513 (Slc1a6)
Transporters [BR:mmu02000]
 Solute carrier family (SLC)
  SLC1: High-affinity glutamate and neutral amino acid transporter
   20513 (Slc1a6)
SSDB
Motif
Pfam: SDF
Other DBs
NCBI-GeneID: 20513
NCBI-ProteinID: NP_033226
MGI: 1096331
Ensembl: ENSMUSG00000005357
UniProt: O35544 B2RQX4 Q3TXM3
Position
10:78615923..78650659
AA seq 561 aa
MSSHGNSLFLRESGAGGGCLQGLQDSLQQRALRTRLRLQTMTREHVRRFLRRNAFILLTV
SAVIIGVSLAFALRPYQLSYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLDNKA
TGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETVPTADAFMDLVR
NMFPPNLVEACFKQFKTQYSTRVVTRTIVRTDNGSELGASMSPTSSVENETSILENVTRA
LGTLQEVISFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLNEAI
MRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPLIYF
LVTHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVN
MDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSV
GLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLGKPY
KSLMAQEKGASRGRGGNESVM
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagcagccacggcaatagtctgttcctgagggagagcggtgccggtgggggctgtctg
cagggcctgcaggacagcctgcagcagagagcactgcgcacgcgcttgcgcctgcagacc
atgacccgagagcacgtgaggcgcttcctgcgccggaatgccttcatcttgctcacagtc
agcgctgtgatcattggtgtcagcttggcatttgccttgcgcccgtaccagctctcctac
cgccagatcaagtacttctcctttcctggtgagctgctcatgaggatgctgcagatgctg
gtgttacccctcattgtctccagccttgtcacaggtatggcatccctggacaacaaggcg
acagggcggatgggaatgcgggcagctgtgtactacatggtgactacagtcattgcagtt
ttcatcggcatcctaatggttaccatcatacatcctgggaagggctccaaggaggggctg
caccgtgagggccgaattgagactgtcccaacagctgatgctttcatggacctggtcaga
aatatgtttccacctaaccttgtggaggcctgcttcaaacagtttaagacacagtacagc
acacgagtggtgacaaggacaattgtaaggacagacaatggttcagagctgggggcctcc
atgtctcccacatcctcagtagaaaatgaaaccagcatcctggaaaatgtcacccgggcc
ttgggcaccctgcaggaggtgataagctttgaggagactgtgcctgtacctggctcagcc
aatggcatcaatgccttgggccttgtggtcttctctgtggcctttgggctggtcattggt
ggcatgaagcacaaaggccgtgtcctgagggacttctttgacagcctcaatgaggctatt
atgaggctggtgggcatcatcatctggtatgcaccagtgggcatcctgttcctgattgct
ggaaagattctggaaatggaagacatggctgtccttggaggtcagctgggcatgtacaca
ctgactgtcatcgttggcttattccttcatgctggtggtgtgttgccccttatctacttc
ctcgtcacccatcggaacccctttcccttcattggtggtatgctacaggcactcatcaca
gctatgggtacctcttccagctctgcaactctgcctatcactttccgctgcctggaggag
ggcctgggtgtggatcgtcgcatcaccaggttcgtgctgcctgtgggggccactgtcaac
atggatggcactgcactctacgaggccttggcagccatctttattgctcaagtcaacaac
tatgagctcaaccttggtcagatcaccacaatcagcatcacagccacagctgccagcgta
ggagcagctggcatcccccaggcaggactggttaccatggtgattgtgctcacatccgtc
ggcctgcccacagaggacatcacactgatcatagctgtggattggttccttgaccgactt
cgtacaatgaccaatgtactgggggattcgattggagcggctgtcattgagcatttgtcc
caacgggagctggagctgcaggaggctgagctgactctacccagcctggggaaaccctat
aagtcactcatggcacaagaaaagggggcatcaaggggtcggggaggtaatgagagcgtc
atgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (18)   
   RefSeq(nuc) (6)   
   GenBank (6)   
   EMBL (6)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

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