KEGG   Mus musculus (house mouse): 20585
Entry
20585             CDS       T01002                                 
Symbol
Hltf, P113, Smarca3, Snf2l3
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    20585 (Hltf)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    20585 (Hltf)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     20585 (Hltf)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    20585 (Hltf)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    20585 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4_3 DEAD zf-C3HC4 ResIII zf-RING_2 zf-RING_UBOX zf-RING_5 zf-ANAPC11 HDA2-3 zf-C3HC4_4 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 20585
NCBI-ProteinID: NP_033236
MGI: 1196437
Ensembl: ENSMUSG00000002428
UniProt: Q6PCN7
Position
3:20111959..20172655
AA seq 1003 aa
MSYTFTRGPVWKYSQSVQYGSHENIPRLSYSTFLPHFEFQDIIPPDDFLTSDEEQDLVLF
GTMRGQVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHIKREIAAAVA
YIMDNKLAQVEGVVPFGASNTFTMPLYMTFWGKEENRNVVLEQLKKHGFKLGPTPKTLGS
SLENAWGSGRAGPSYSRPAHVAVQMTTDQLKTEFDKLFEDLKEDDRTVEMEPAEAIETPL
LPHQKQALAWMIARENSKELPPFWEQRNDLYYNTITNFSVKERPENVHGGILADDMGLGK
TLTAIAVILTNFDDGRPLLSKRGKKNHPGKEYKDETIKRRGSNMDKKEDGHSESSTCGEE
PSISGTPEKSSCTLSQLSSVCPKRRKISVQYIESSDSEEIETSELPQKMKGKLKNVQLNT
KSRVKGSSKVKEDSKFALTFFASATQRKMLKKGMSMMECSEACDTGERTRATLIICPLSV
LSNWIDQFGQHVKSEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNILTHDYGTKDDSPL
HSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKLK
PFIDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQ
HITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTNGM
SSSGPSRSDTPEELRKMLIEKMKIILSSGSDEECAICLDSLTFPVITHCAHVFCKPCICQ
VIHSEQPHAKCPLCRNEIHGDNLLECPPEELACDSDKESSMEWKSSSKINALMHALIELR
TKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPT
IMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSV
EENMLKIQNTKRDLAAGAFGTKKTDANDMKQAKINEIRTLIDL
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgtcctatacgttcacgaggggtcctgtttggaagtattcgcagtctgtccagtatgga
tcacacgaaaatattccaagactttcatactcaactttcttgccacattttgaattccaa
gacattattcctccagatgacttcctaacgagtgatgaagagcaagatttggttttattt
ggaactatgagaggacaagttgttggactacgctattacacaggagttgtaaataataat
gaaatggttgctttacaacgagagcctaataatccctatgataagaatgctattaaagta
aataatgtgaatggaaatcaggttggccatataaagagagagattgcagctgccgtggcc
tatatcatggacaacaaattggcacaagtggaaggtgtagttccttttggtgcaagtaat
acttttaccatgcctctttatatgactttctggggaaaagaagaaaatagaaacgtggtt
ttagagcagttgaagaaacatggatttaagttgggtcccacaccaaagactttagggtcg
agtttggagaacgcatggggctctggaagagctggaccaagctatagtaggccggctcat
gtggcagtacagatgacaactgaccagctcaaaacggaatttgacaaattatttgaagat
ttaaaagaagatgatagaactgttgaaatggaaccagctgaggctattgaaacaccgttg
cttccacaccaaaaacaagctctagcttggatgatcgcacgagagaacagtaaagaacta
ccaccattctgggaacagcgcaatgacttatattataatacaataacaaatttttctgtg
aaggaacgaccggaaaatgttcatggaggaattttagcggatgatatgggtttgggcaaa
actcttactgctattgctgtcattcttaccaactttgatgatggcaggcctcttctcagt
aagagaggcaagaagaatcatccaggaaaggaatacaaggatgagaccattaaacgcaga
ggaagtaatatggacaagaaggaagatggacactcagagtcatccacgtgtggtgaagaa
cccagtatttcaggaactccggagaagagtagctgtactctgtcgcagctgtctagcgtc
tgccctaagagaagaaaaatttctgtacagtacattgaaagtagtgattcagaggaaatc
gagacaagcgaactgccccagaaaatgaaaggcaagctgaaaaatgtacagttaaatact
aaaagtagagtaaaaggatcatctaaggttaaggaagattcaaaatttgcacttactttt
tttgcctctgcaacacaaaggaaaatgttgaaaaaaggcatgtctatgatggagtgctca
gaggcatgtgacactggagagaggacaagagcaacactgatcatctgtccactctctgtg
ctcagcaactggattgaccagtttggacaacatgtaaaatcagaagtgcacttgaatttt
tatgtttattatggtcctgatcgtattagagattcagcctggctttcaaaacaggatatt
attttgactacttacaatattttaactcatgattatggaactaaagatgatagtccattg
catagcatcaagtggttaagggtgatcctggatgaaggccatgccattcgaaatccaaac
gctcagcagacaaaagctgtacttgagttagaggcagaaagaagatgggtattgacaggt
actcctatccagaattctttaaaggacttgtggtctcttctgtccttcttaaaacttaag
ccatttattgatagagagtggtggtataggatcatacagcgtcctgtcactacaggagat
gagggaggacttaggcgtttacagtccttaataaaaaatatcacgcttagaagaacaaag
acaagcaaaattaaagggaaacctgttttggagttgccagaaaggaaagtatttattcag
cacattactctgtcagaagaagagagaaagatttatcagtctgttaaaaatgaaggcaaa
gctgccattggaaggtattttactgaagggactgtccttgcacactatgcagatgtcttg
ggtcttctgcttagattgcggcagatttgttgccatacccatcttcttacaaacggaatg
tcttcaagtggcccctccagaagtgacacgcctgaagagctgagaaagatgttaatagag
aagatgaagataattctgagctctggttcagatgaggaatgtgcaatctgcctggattcc
ttaacatttcctgtgataacccactgtgcacacgtgttctgtaaaccttgtatctgtcag
gtcattcacagtgagcagccacatgcaaagtgtcctttgtgcagaaatgagatacatgga
gataatctattagaatgtcctcccgaagaattggcatgtgacagtgacaaagagtccagt
atggaatggaagtccagctcaaagattaatgctctaatgcatgctttgattgaattacgg
acaaaggaccccaacataaaaagtttagttgtttctcagtttaccacattcttgtcttta
atagaaacacctcttaaagcctcaggatttgtgtttactcgtttagatggttccatggct
caaaagaaaagagttgaatcaattcagcgttttcaaaacacagaagcaggatctcctacg
ataatgctactgtccttaaaagcaggtggagttggcttgaatctctgcgcagcttctcga
gtgttcttaatggatcccgcctggaatcctgctgcagaagatcagtgctttgaccggtgc
catcgacttggccagaagcaagaggtgatcatcacaaaattcattgtgaaggactctgtg
gaagaaaatatgttgaaaatacagaacacgaagcgagaccttgcagctggagcctttggc
actaagaaaacagacgccaatgacatgaaacaagctaaaatcaacgaaatcagaacttta
attgacttgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (40)   
   RefSeq(nuc) (8)   
   GenBank (16)   
   EMBL (16)   
Protein domain (16)   
   Pfam (16)   
All databases (110)   

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