KEGG   Mus musculus (house mouse): 20591
Entry
20591             CDS       T01002                                 
Symbol
Kdm5c, D930009K15Rik, Jarid1c, Smcx, mKIAA0234
Name
(RefSeq) lysine demethylase 5C
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mmu01009]
    20591 (Kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    20591 (Kdm5c)
Enzymes [BR:mmu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     20591 (Kdm5c)
Protein phosphatases and associated proteins [BR:mmu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     20591 (Kdm5c)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    20591 (Kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD ASH2L-like_WH
Other DBs
NCBI-GeneID: 20591
NCBI-ProteinID: NP_038696
MGI: 99781
Ensembl: ENSMUSG00000025332
UniProt: P41230
Position
X:151015698..151062098
AA seq 1551 aa
MELGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYETICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKMESTSPKTFLEGKEELSH
SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTEL
VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP
VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQEAGP
DRVAGLQMTLAELRDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGL
LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASV
APSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQ
SLKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
RDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLALLTTASSTASICVCGQVPAGVGAL
QCDLCQDWFHGRCVTVPRLLSSQRSSLPSSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
LLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGRLAELRQRLQAESK
PEESLAYPSDGGEGTGNMPKVQGLLENGDSVTSPEKVATEEGSDLELLSSILPQLSGPVL
ELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLKRVQTLLELEKAERHGSR
TRGRALERRRRRKVDRGGEPDDPAREELEPKRVRSSGPEAEEVQEEEELEEETGGEVPPV
PFPNSGSPSIQEDQDGLEPVLEAGSDTSAPFSTLTSRLLMSCPQQPSLQQL
NT seq 4656 nt   +upstreamnt  +downstreamnt
atggagctggggtccgacgatttcctaccgccgccggagtgtccggtgttcgagcctagc
tgggccgagttccgagaccctcttggctacatcgcgaaaatcagacccatcgccgagaag
tccggcatttgcaagatccgcccacccgcggactggcagccaccctttgccgtggaagtg
gataacttcaggtttactccccgaatccagaggttgaatgagctggaggcccagacaaga
gtgaaactgaactatttggaccagattgccaaattctgggagatccagggctcatcctta
aagattcccaatgtagaacggcggatcttggacctctatagcctcagcaaaattgtggtg
gaagaaggtggttatgaaactatctgcaaggaccgtcgatgggcccgtgtggcccagcgt
ctcaactacccacctggcaaaaacattggttccttgctacgctctcactatgaacgcatt
gtttatccctatgaaatgtaccagtctggagccaaccttgtgcagtgtaacacacgccca
tttgataatgaggaaaaggacaaggaatataaaccccacagcatcccccttcgacagtct
gtgcagccttccaagttcaacagttatggacgacgggcaaagagactacagcctgatccg
gaacccacagaggaagacattgaaaagaatccagaactgaagaaattacagatatatgga
gcaggccccaagatgatggggctgggcctaatggccaaagataagactctgcggaaaaaa
gataaagaagggcctgagtgtccccccactgtggtggtaaaggaggaattaggtggggat
gtcaagatggaatcaacctcacccaagaccttcctagaaggcaaggaggaactgagtcat
agccctgagccctgcaccaagatgaccatgaggcttcgaaggaaccacagcaatgcccag
tttattgagtcatacgtatgccgaatgtgttcccgaggagatgaagatgacaaactctta
ctgtgtgatggctgtgatgacaattaccacatcttttgcctgctgcctcctttgcctgaa
atcccgaaaggtgtctggaggtgtccaaagtgtgtcatggcggagtgtaagcggccccct
gaagcctttggctttgagcaagctacccgggaatatactctgcagagctttggagagatg
gctgactcctttaaagctgactacttcaacatgcctgtgcatatggtacccacagaactt
gtagagaaggagttttggcggctggtgaatagcatcgaggaagacgtaactgtggagtat
ggggctgacatccattccaaagaatttggcagcggtttccctgtcagtgacagtaagcgg
cacctaaccccagaggaggaggagtatgctacaagtggttggaacctgaatgtgatgcct
gtattggagcagtctgtactgtgccacatcaatgcagatatatctggcatgaaggtaccg
tggctgtatgtgggaatggtcttctcagccttttgctggcatattgaagatcactggagt
tactctattaactacctccactggggtgagccaaaaacctggtatggagtcccatcgctt
gcagcggaacacttggaagaagtgatgaagaagctgacacctgagctttttgatagccag
cctgatctccttcaccaactcgtcaccctcatgaatcctaacacgctcatgtcccatggt
gtgccggttgtccgcacaaaccagtgtgcaggagaatttgtcatcacttttcctcgtgct
taccacagtggtttcaaccaaggctacaactttgctgaggcagtcaacttttgcactgct
gactggctgcctgctgggcgccaatgcattgagcactaccgccgactacgaagatactgt
gtcttttctcatgaggagctcatttgcaagatggctgcctgccctgagaaactggacctg
aacctggcagcagctgtacataaggagatgttcattatggtgcaagaggagcggcgtcta
cgaaaggctctgttggaaaaaggtatcaccgaggctgagcgagaggcttttgagctgctt
ccagatgatgaacgtcagtgcataaagtgcaagaccacatgtttcctatctgccctggct
tgctatgactgcccagatggccttgtctgcctttctcacatcaatgacctctgcaagtgc
tccagtagccgccagtaccttcggtatcggtacaccttggatgagctccctgccatgctg
cataaactgaaagttagagctgagtcctttgacacctgggctaacaaagtacgagtggcc
ctggaggtggaagatgggcggaagcgcagcctggaagaactgagagcactagaatctgag
gctcgtgagcgaaggtttcctaacagtgagcttctacagcgactgaaaaactgcctgagt
gaagcagaggcttgtgtgtcccgggctctgggattggtcagtggccaggaagctggccct
gacagggtggctggcctacagatgaccctggctgagctacgggattttctgggccagatg
aacaacctgccctgtgccatgcaccagattggggatgtcaagggtattctggaacaggtg
gaagcctaccagactgaggcccgtgaggccctggtctcacagccttccagtccagggctg
ctgcagtccttgttggagagaggacaacagctgggtgtggaggtacctgaagcccagcag
ctccaaaggcaggtggaacaggcgcggtggctggatgaggtaaaacgcacgctggctccc
tctgcccgaaggggtaccctggccatcatgcggggactgttggttgcgggcgccagtgta
gcccctagccctgctgtggataaggcccaggcagagcttcaggagctgctgaccatcgct
gaacgctgggaagagaaagcccacctctgcttagaggccaggcagaagcatccaccagcc
acacttgaggccataatccatgaagcagaaaacatccctgttcacttgcccaatatccag
tctctcaaggaggctcttgctaaggcccgggcatggattgctgatgtggatgagatccaa
aatggtgaccactacccttgcttggatgacttggagggcctcgtagctgtgggtcgggac
ctccctgtggggctggaggaactgagacagctagagctacaggtattgacagcacactcc
tggagagaaaaggcctccaagaccttcctcaagaagaactcctgctatacattattggag
gtgctctgcccgtgtgcagacgccggctcagacagcaccaaacgcagccggtggatggag
aaggagctggggttgtacaaatctgacacagagctgttggggctgtctgcgcaggacctc
agggacccaggctctgtgatcgtggccttcaaagagggggagcagaaggagaaggaaggg
atactgcagcttcgtcgtaccaactcagccaagccaagtccactggcactgttgacaaca
gcctcctctacagcttctatctgcgtgtgtgggcaagtgccagctggggtgggagctctg
cagtgtgacctgtgtcaggactggttccatgggcgctgtgtgacagtaccccgcctcctc
agctcccagaggtccagtcttccctcatccccactgctggcctggtgggaatgggacacc
aaattcttgtgccctctgtgtatgcgctcacggcgcccacgcttggaaaccatcctggca
ctgctggtagccctacagagactgcctgtgcggctgcctgagggtgaggctctacagtgc
ctcacagagagagccatcagctggcaaggccgtgccagacaggttttggcctctgaggaa
gtgactgctctgttgggacggctggctgaactgcgccaacggctacaggctgaatccaag
cctgaggagtccctggcttacccttcagatggtggagagggcactggcaatatgccgaag
gtccaggggctgttggagaatggggacagtgtgaccagtcctgaaaaggtagccacagag
gagggctcagatctggagctgctatcctcaatattaccacagttgtctggccctgtgttg
gaactgcctgaggcaacccgagccccactggaggaacttatgatggaaggggatctgctt
gaggtgaccctagatgagaatcatagcatctggcagctgctgcaggctgggcagcctcca
gacttgaagagggtccagacacttctggagctggagaaggcagagcgccatgggagtcgg
acacgaggccgagccctagagaggagacgacggaggaaggtggatcggggtggggagccg
gatgacccggcacgagaggagctagagccaaagagggtacgaagctcaggaccagaagcc
gaggaagtccaggaggaagaggagctggaggaggagactgggggtgaggtccctcctgta
cccttccccaacagtggcagccccagcatccaggaggaccaggatggcttagaaccagtg
ttagaggctggttctgacacctcagcccctttctctactctgacttcccggctgttgatg
tcctgcccacagcagccatctctgcaacaattgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (74)   
   RefSeq(nuc) (12)   
   GenBank (31)   
   EMBL (31)   
Protein domain (8)   
   Pfam (8)   
All databases (127)   

Download RDF
DBGET integrated database retrieval system