KEGG   Mus musculus (house mouse): 20660
Entry
20660             CDS       T01002                                 
Symbol
Sorl1, 2900010L19Rik, LR11, SorLA, gp250, mSorLA
Name
(RefSeq) sortilin-related receptor, LDLR class A repeats-containing
  KO
K24498  sortilin-related receptor
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    20660 (Sorl1)
Membrane trafficking [BR:mmu04131]
 Endosome - Golgi transport
  Others
   Others
    20660 (Sorl1)
SSDB
Motif
Pfam: Ldl_recept_a Sortilin-Vps10 Sortilin_C fn3 Ldl_recept_b Pur_ac_phosph_N Interfer-bind BNR_6
Other DBs
NCBI-GeneID: 20660
NCBI-ProteinID: NP_035566
MGI: 1202296
Ensembl: ENSMUSG00000049313
UniProt: O88307
Position
9:complement(41876005..42035593)
AA seq 2215 aa
MATRSSRRESRLPFLFALVALLPRGALGGGWTQRLHGGPAPLPQDRGFFVVQGDPRDLRL
GTHGDAPGASPAARKPLRTRRSAALQPQPIQVYGQVSLNDSHNQMVVHWAGEKSNVIVAL
ARDSLALARPKSSDVYVSYDYGKSFSKISEKLNFGVGNNSEAVISQFYHSPADNKRYIFV
DAYAQYLWITFDFCSTIHGFSIPFRAADLLLHSKASNLLLGFDRSHPNKQLWKSDDFGQT
WIMIQEHVKSFSWGIDPYDQPNAIYIERHEPFGFSTVLRSTDFFQSRENQEVILEEVRDF
QLRDKYMFATKVVHLPGSQQQSSVQLWVSFGRKPMRAAQFVTKHPINEYYIADAAEDQVF
VCVSHSNNSTNLYISEAEGLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGL
QGVYIATLINGSMNEENMRSVITFDKGGTWEFLQAPAFTGYGEKINCELSQGCSLHLAQR
LSQLLNLQLRRMPILSKESAPGLIIATGSVGKNLASKTNVYISSSAGARWREALPGPHYY
TWGDHGGIIMAIAQGMETNELKYSTNEGETWKTFVFSEKPVFVYGLLTEPGEKSTVFTIF
GSNKESVHSWLILQVNATDALGVPCTENDYKLWSPSDERGNECLLGHKTVFKRRTPHATC
FNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDLSLEVCVPDPEFSGKPYSPPVPCPVGS
SYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAMRKSIYRYDLASGATE
QLPLSGLRAAVALDFDYERNCLYWSDLALDTIQRLCLNGSTGQEVIINSGLETVEALAFE
PLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKP
GIYRSYMDGSAAYRLVSEDVKWPNGISVDSQWIYWTDAYLDCIERITFSGQQRSVILDSL
PHPYAIAVFKNEIYWDDWSQLSIFRASKHSRSQVEILASQLTGLMDMKVFYKGKNAGSNA
CVPQPCSLLCLPKANNSKSCRCPEGVASSVLPSGDLMCDCPQGYQRKNNTCVKEENTCLR
NQYRCSNGNCINSIWWCDFDNDCGDMSDERNCPTTVCDADTQFRCQESGTCIPLSYKCDL
EDDCGDNSDESHCEMHQCRSDEFNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHTCE
ASNFQCHNGHCIPQRWACDGDADCQDGSDEDPVSCEKKCNGFHCPNGTCIPSSKHCDGLR
DCPDGSDEQHCEPFCTRFMDFVCKNRQQCLFHSMVCDGIVQCRDGSDEDAAFAGCSQDPE
FHKECDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFHCENGH
CIPNRWKCDRENDCGDWSDEKDCGDSHVLPSPTPGPSTCLPNYFHCSSGACVMGTWVCDG
YRDCADGSDEEACPSLANSTAASTPTQFGQCDRFEFECHQPKKCIPNWKRCDGHQDCQDG
QDEANCPTHSTLTCTSREFKCEDGEACIVLSERCDGFLDCSDESDEKACSDELTVYKVQN
LQWTADFSGDVTLTWMRPKKMPSASCVYNVYYRVVGESIWKTLETHSNKTSTVLKVLKPD
TTYQVKVQVHCLNKVHNTNDFVTLRTPEGLPDAPRNLQLSLNSEEEGVILGHWAPPVHTH
GLIREYIVEYSRSGSKMWASQRAASNSTEIKNLLLNALYTVRVAAVTSRGIGNWSDSKSI
TTIKGKVIQAPNIHIDSYDENSLSFTLTMDGDIKVNGYVVNLFWSFDAHKQEKKTLSFRG
GSALSHRVSNLTAHTSYEISAWAKTDLGDSPLAFEHILTRGSSPPAPSLKAKAINQTAVE
CIWTGPKNVVYGIFYATSFLDLYRNPKSVTTSLHNKTVIVSKDEQYLFLVRVLIPYQGPS
SDYVVVKMIPDSRLPPRHLHAVHIGKTSALIKWESPYDSPDQDLFYAIAVKDLIRKTDRS
YKVRSRNSTVEYSLSKLEPGGKYHIIVQLGNMSKDSSIKITTVSLSAPDALKIITENDHV
LLFWKSLALKEKQFNETRGYEIHMSDSAVNLTAYLGNTTDNFFKVSNLKMGHNYTFTVQA
RCLFGSQICGEPAVLLYDELSSGADAAVIQAARSTDVAAVVVPILFLILLSLGVGFAILY
TKHRRLQSSFSAFANSHYSSRLGSAIFSSGDDLGEDDEDAPMITGFSDDVPMVIA
NT seq 6648 nt   +upstreamnt  +downstreamnt
atggcgacacggagcagcaggagggagtcgagactccctttcctattcgccctggtcgcg
ctgctaccccgcggggctctcggcgggggctggacgcagagattgcacggtggcccggcg
cccttgccccaggaccggggcttcttcgtggtgcagggcgacccgcgcgatctccggcta
ggaacgcacggggatgccccgggggcgagcccggcggccaggaagccactcaggacccgg
cggagcgctgctctgcagccccagcctatccaggtgtatggacaggtcagtctgaatgac
tcccacaatcagatggtggtgcactgggccggagagaaaagcaacgtgatcgtggcatta
gcccgagacagcctggcgttggcaaggcccaagagcagtgatgtgtatgtgtcttacgac
tatggaaaatcattcagtaagatttcagagaagctgaactttggcgtgggcaacaacagc
gaagctgtgatctcccagttctaccacagccctgctgacaacaagaggtacatctttgtg
gatgcttacgcccaatacctctggatcacatttgacttctgcagcactatccatggcttc
tccatcccattccgggcggctgatctcctcctccatagcaaggcctccaacctcctcttg
ggctttgacaggtctcaccccaacaagcagctatggaagtcagatgattttggccagacc
tggatcatgattcaggaacacgtgaagtccttctcttggggaatcgacccctatgatcag
ccaaacgctatctacattgagcgacatgaaccctttgggttctccacagtgctccgcagt
acagacttcttccagtcccgggaaaaccaggaagtgatcctggaggaagtgagagacttt
cagcttcgcgacaagtatatgtttgctacaaaggtggtgcatcttccgggcagccagcag
cagtcatctgtccagctctgggtctcctttggccggaagcctatgagagcagcccagttt
gtcacaaagcatcctattaatgaatattacatcgctgatgccgccgaggaccaggtgttc
gtgtgtgttagccacagtaacaacagcactaacttatacatctcagaggcagaggggctg
aagttctccctctccttggagaatgtgctgtattacagcccaggaggggccggcagtgac
actctggtgaggtattttgcaaatgagccgtttgccgactttcaccgcgtggaaggctta
caaggagtctatattgccaccctgattaatggttctatgaatgaggagaacatgaggtcg
gtcatcacctttgacaaagggggaacctgggaatttcttcaggccccagccttcacagga
tatggagagaaaatcaattgtgagctttctcagggttgttccctccacctggcccagcgc
ctcagtcaactgctcaacctccaacttcggaggatgcctatcctatccaaggagtcagcc
cccggtctcatcattgctaccggctctgtgggaaagaacttggccagcaagaccaatgtg
tacatctctagcagtgctggagccaggtggagagaggctcttcccggacctcattactat
acttggggtgaccatggaggcatcatcatggcgattgcccagggcatggagaccaacgag
ctgaagtacagcaccaatgaaggggagacctggaagacgttcgtcttctcggagaagcct
gtgtttgtgtatgggcttctcacagaacctggtgagaagagcaccgtcttcaccatcttc
ggctcgaacaaggagagtgtccacagctggctcatcctgcaggtcaatgccactgatgcc
ttgggggttccttgcacagaaaacgactacaagctgtggtccccatctgatgagcgagga
aatgagtgtttgctaggacacaagacagttttcaaaaggaggacccctcatgccacgtgc
tttaatggggaagactttgaccggccagtggttgtgtccaactgctcctgcacccgggag
gactacgaatgtgactttggcttcaagatgagcgaagatctctccttagaggtttgtgtt
ccagaccctgagttttctgggaagccctacagccctcctgtgccttgtcctgtgggttct
tcatacaggagaacgagaggctatcggaagatttctggggatacgtgcagtggaggagac
gttgaagcgcggctggaaggggagctggtcccctgtccccttgcagaagagaatgagttc
atcctatacgccatgcgcaagtccatctaccgctacgacttggcctcgggagccacagag
cagcttcctctctcggggctgcgggcggctgtggccctggactttgactatgaacgcaac
tgcttgtattggtctgacctggcgctggacaccatccagcgtctctgcttgaacgggagc
acagggcaggaggtgatcatcaattccggcctggagaccgtggaggctttggccttcgaa
cccctcagccaattactttactgggtggatgccggctttaaaaagatcgaggtagctaat
ccagatggtgacttccgactgacaatcgtcaattcctctgtgcttgatcgacccagggct
ttagtccttgtaccccaagaaggggtgatgttctggactgactggggggacctgaagcct
gggatttaccggagctacatggacggctctgctgcctaccgccttgtgtcagaggacgtg
aagtggcccaatggcatctctgtggacagccagtggatctactggacggatgcttacctg
gactgtatcgagcgcatcactttcagtggccagcagcgttcagtcatccttgacagcctc
ccacacccctatgccatcgctgtctttaagaatgagatctactgggatgactggtcacag
ctcagcatcttcagagcttcgaagcacagcagatcccaggtggagattctagcaagccag
ctcacgggcctcatggacatgaaggttttctacaagggaaagaatgctggaagcaacgct
tgtgtccctcagccctgcagtctactgtgcctccctaaggccaacaacagcaaaagctgc
aggtgtccagaaggtgtggccagcagtgtcctcccctctggggacctgatgtgtgactgc
cctcagggctatcaaaggaagaacaacacctgtgtcaaagaagagaacacctgtctccga
aaccagtatcgctgcagcaacggcaactgtatcaacagcatttggtggtgtgatttcgac
aatgactgtggagacatgagtgacgagagaaattgccccacgacggtctgtgatgcagac
actcagttccggtgccaggagtcggggacttgcattccactctcctataagtgtgacctt
gaagatgactgtggagataacagtgatgagagtcactgtgagatgcaccagtgtcgtagc
gacgagttcaactgcagctctgggatgtgcatccggtcctcctgggtgtgcgatggagac
aacgactgtagggactggtctgatgaagccaactgtactgccatctatcatacctgtgag
gcctccaacttccagtgccacaatggccactgcatcccccagcgatgggcatgtgacggt
gatgcggattgccaggatggctctgacgaagatcccgtcagctgtgagaaaaagtgcaat
ggattccactgcccaaacggcacgtgcatcccgtccagcaagcattgtgatgggctgagg
gactgccccgacggctccgatgagcagcactgtgagcccttctgcacgcgcttcatggac
ttcgtgtgtaagaaccgtcagcagtgtctgttccactccatggtgtgtgacgggatcgtc
cagtgccgagatggctctgatgaggatgcggccttcgctggatgctcgcaagaccccgag
ttccacaaggagtgcgatgagttcggcttccagtgtcagaacggagtgtgcatcagcttg
atttggaaatgcgatgggatggatgactgcggggactactctgacgaggccaactgtgaa
aaccccacggaagccccaaactgttcccgttactttcagttccactgtgagaatggccac
tgcatccccaacaggtggaaatgtgacagagagaacgactgtggggactggtctgatgag
aaggattgtggagattcacatgttctaccctccccgacccccgggccctccacgtgtctg
cccaattacttccactgcagcagcggggcctgtgtgatgggcacctgggtgtgcgacggc
tacagggactgtgcagatggctctgatgaggaggcctgcccctctctagcaaactccact
gccgcctccactcccacccagttcgggcagtgcgaccgatttgagttcgagtgtcaccaa
ccaaagaaatgtatccccaactggaagcgctgtgacggccaccaagattgccaagacggc
caggatgaagccaactgccccactcacagcaccttgacctgtacgagcagggagttcaag
tgtgaggacggcgaggcatgcatcgtgctctcggagcgctgtgatggcttcctggattgc
tctgatgagagcgatgagaaggcctgcagcgatgagttaactgtatacaaagtgcagaat
ctccagtggacagctgatttctccggagatgtgactttgacctggatgcggccaaagaaa
atgccatctgcttcttgtgtatacaatgtctactacagggtggttggagagagcatatgg
aagaccctggaaacccacagcaataaaacaagcactgtgctcaaggtcctgaagccagac
accacgtaccaggttaaggtccaggtgcactgcctcaacaaggtgcacaacaccaatgac
tttgtgaccctcaggactccagaagggttgccagatgcccctcggaatctccagctctcc
ctgaacagtgaagaggaaggtgtgattctcgggcactgggctcctcccgtccacacccat
ggcctcatccgtgagtacattgtggaatacagcaggagtgggtccaagatgtgggcctcc
cagagagctgctagcaactctacagaaataaagaacttactgctcaatgccctctacact
gtcagagtggctgcggtgactagtcgtgggataggaaactggagcgattctaagtccatc
accaccataaaaggaaaagtgatccaagcaccaaatatccacattgacagctacgatgaa
aattctctgagctttaccctgaccatggatggtgacatcaaggtcaatggctacgtggtg
aaccttttctggtcatttgatgcccacaaacaagaaaagaaaaccctgagcttccgcgga
gggagtgcactgtcacacagagttagcaacctgacagctcatacatcctatgagatttct
gcctgggccaagacagacttgggagatagcccactggcctttgagcacatcttgaccaga
ggcagcagtccaccagctcctagtctcaaagccaaggccatcaatcagactgcagtggag
tgcatctggactggccccaagaatgtggtgtatggtattttctatgccacatccttcctt
gacctctaccgaaaccctaagagcgtaactacttcgctccacaataagacagtcatcgtc
agcaaggatgagcagtatctgtttctggtccgggtgttgatcccttaccaagggccgtct
tctgactacgttgtagtgaagatgatcccagacagcaggctcccgcctcggcatctgcac
gcggtccacataggcaaaacctcagcactcatcaaatgggaatcgccctatgactctcct
gaccaggacttgttctacgccattgcagtgaaagatctgatcaggaagacggacagaagc
tacaaagtcagatcccgcaacagtactgtggagtacagcctaagcaagctggaacctgga
gggaaataccacatcattgtccagctgggaaacatgagcaaggattccagcataaaaatc
accacagtttcgttatcagcacctgatgccttaaaaatcataacggaaaacgaccacgtt
ctcctcttttggaaaagcctagcactgaaggaaaagcagttcaatgaaaccaggggctat
gagatccacatgtctgacagcgctgtgaatctcaccgcttacctcgggaatactacggac
aatttctttaaagtgtccaacctgaagatgggtcataactacactttcacggtccaagcg
cggtgtctctttggtagccagatctgtggggagcccgccgtgctgctgtacgatgaactg
agctcaggtgcagatgcggcagtgatccaggctgcccggtctactgatgttgcagctgtg
gtggttcccatcctgttcctgatcctgctgagcctgggtgtcggcttcgccatcctctac
acgaagcaccgtcgcttacaaagcagcttcagcgctttcgccaacagccactacagctcc
aggctgggctcggccatcttctcctcaggggatgacctaggagaggacgatgaagatgct
cccatgattactggattctcagacgatgtccccatggtgatagcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (26)   
   RefSeq(nuc) (2)   
   GenBank (12)   
   EMBL (12)   
Protein domain (8)   
   Pfam (8)   
All databases (90)   

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