KEGG   Mus musculus (house mouse): 20661
Entry
20661             CDS       T01002                                 
Symbol
Sort1, 2900053A11Rik, Ntr3, Ntsr3
Name
(RefSeq) sortilin 1
  KO
K12388  sortilin
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04142  Lysosome
mmu04722  Neurotrophin signaling pathway
mmu04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    20661 (Sort1)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    20661 (Sort1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    20661 (Sort1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR
Other DBs
NCBI-GeneID: 20661
NCBI-ProteinID: NP_064356
MGI: 1338015
Ensembl: ENSMUSG00000068747
UniProt: Q6PHU5
Structure
Position
3:108191272..108268835
AA seq 825 aa
MERPRGAADGLLRWPLGLLLLLQLLPPAAVGQDRLDAPPPPAPPLLRWAGPVGVSWGLRA
AAPGGPVPRAGRWRRGAPAEDQDCGRLPDFIAKLTNNTHQHVFDDLSGSVSLSWVGDSTG
VILVLTTFQVPLVIVSFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKV
ILTAEVSGGSRGGRVFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVS
KNFGEKWEEIHKAVCLAKWGPNNIIFFTTHVNGSCKADLGALELWRTSDLGKTFKTIGVK
IYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANEDMVF
MHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSTLSED
NSIQSMITFDQGGRWEHLRKPENSKCDATAKNKNECSLHIHASYSISQKLNVPMAPLSEP
NAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWAKMLEGPHYYTILDSGGIIVAIEHSNR
PINVIKFSTDEGQCWQSYVFTQEPIYFTGLASEPGARSMNISIWGFTESFITRQWVSYTV
DFKDILERNCEEDDYTTWLAHSTDPGDYKDGCILGYKEQFLRLRKSSVCQNGRDYVVAKQ
PSVCPCSLEDFLCDFGYFRPENASECVEQPELKGHELEFCLYGKEEHLTTNGYRKIPGDK
CQGGMNPAREVKDLKKKCTSNFLNPTKQNSKSNSVPIILAIVGLMLVTVVAGVLIVKKYV
CGGRFLVHRYSVLQQHAEADGVEALDSTSHAKSGYHDDSDEDLLE
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggagcggccccggggagctgcggacggccttttgcgctggcccctcggcctcctcctg
ctccttcaactgctgcctcctgccgccgtcggccaggaccggctggacgcgccgccgccg
cccgcgcctcctctgctgcgctgggccggtccggtcggggtgagctgggggctgcgcgcc
gccgcgcccgggggccccgtcccccgcgctggccgttggcgccgcggcgcgcccgccgag
gaccaagactgcggccgcctcccggacttcatcgccaagctgaccaacaatacgcaccag
catgtctttgatgacctcagtggctcagtgtccttgtcctgggttggagacagcactggg
gttattctcgtcctgaccactttccaagtgcctctggtaattgtgagctttggacagtcc
aagttgtatcgaagtgaggattatggaaagaactttaaggatattacaaatctcatcaat
aacaccttcattcggacggaatttggcatggctattggtcctgagaactctggaaaggtg
atactaacagcggaggtgtccgggggaagccgaggcggaagagtgttcaggtcatcagac
tttgccaagaactttgtgcaaacagatctcccctttcatcctctgacgcagatgatgtac
agccctcagaattctgattacctgttagctctcagcaccgaaaatggcctgtgggtgtcc
aagaattttggggaaaaatgggaagaaatccacaaagcagtatgtttggccaaatgggga
ccaaacaacatcatcttctttaccacccatgtgaatggctcctgcaaagctgatcttggt
gccctggaattatggagaacatccgacttgggaaaaaccttcaaaaccattggtgtgaaa
atctactcctttggtcttgggggccgtttcctttttgcctctgtgatggctgataaggac
acaacaagaaggatccatgtgtcaacagaccagggggacacatggagcatggcacaactt
ccttctgtgggacaggaacagttctactccatcctggcagccaatgaggacatggtcttc
atgcatgtagatgaacctggagataccgggtttggcaccatctttacctctgatgatcga
ggcattgtctactccaagtctctggacagacatctctataccaccacaggcggggagacg
gactttaccaacgtgacttccctccgtggggtctatataacaagcacgctctcagaagat
aactctattcagagcatgatcacttttgaccagggaggacggtgggagcacctgcggaag
ccggagaacagcaagtgcgacgctaccgcaaagaacaagaacgagtgcagccttcatatc
catgcttcttatagcatctcccagaagctaaacgttccaatggccccactttccgagccc
aatgctgtgggcatagtcatcgctcacggtagtgtgggagatgccatctcggtgatggtc
ccagatgtgtacatctcagatgatgggggttactcctgggcgaagatgctagaaggacca
cattactataccatcctggactctggaggcatcattgtggccattgagcacagcaaccgt
cctatcaatgtgattaagttctccacagatgaaggccagtgctggcagagctatgtgttc
acacaggagcccatctacttcactgggcttgcttccgagcctggagccaggtccatgaac
atcagcatctggggattcacagagtctttcattacccgccagtgggtctcctacacagtc
gatttcaaagacatccttgagcggaattgtgaagaggatgactataccacgtggctggca
cactccacagaccctggagattacaaagacggctgcattttgggctataaagaacagttc
ctacggctacggaagtcatccgtctgtcagaatggtcgagactatgttgtggccaagcag
ccatccgtctgtccgtgttccctggaggacttcctctgtgactttggctacttccgtccg
gagaacgcctcagagtgcgtggagcagcctgaactgaaggggcatgagttagagttctgt
ctgtacggcaaggaggagcacctgacaacaaatgggtaccggaaaatcccaggagacaaa
tgccaaggtgggatgaatcccgccagagaagtaaaagacttgaaaaagaaatgcacaagc
aacttcttgaaccccacaaagcagaattccaagtcaaattctgtccctattatcctggcc
atcgtgggactgatgcttgtcacagtcgtagcaggagtcctcattgtgaagaaatatgtc
tgtggcggaaggttcctggtgcaccggtactcggtgctacagcagcacgcagaggctgac
ggcgtagaggctttggattcaacctcccacgctaaaagcggatatcacgacgactcagat
gaggacctcctggaatag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (30)   
   RefSeq(nuc) (6)   
   GenBank (12)   
   EMBL (12)   
3D Structure (5)   
   PDB (5)   
Protein domain (4)   
   Pfam (4)   
All databases (76)   

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