KEGG   Mus musculus (house mouse): 20664
Entry
20664             CDS       T01002                                 
Symbol
Sox1, Sox-1
Name
(RefSeq) SRY (sex determining region Y)-box 1
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    20664 (Sox1)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    20664 (Sox1)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 20664
NCBI-ProteinID: NP_033259
MGI: 98357
Ensembl: ENSMUSG00000096014
UniProt: P53783
Position
8:12445519..12449555
AA seq 391 aa
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGTKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGG
YAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHP
HNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGIPYGAAAAAAAAAGGAHQNSAVAAA
AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAA
AAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcgcccacg
aacctctcgggcccggccggggcgggcgggggcggcggtgggggcgggggcggcggcggc
ggcgggggcaccaaggccaaccaggatcgggtcaagcggcccatgaacgccttcatggtg
tggtcccgcggacagcggcgcaagatggcccaggaaaaccccaagatgcacaactcggag
atcagcaagcgcctcggggccgagtggaaggtcatgtccgaggccgagaagcggccgttc
atcgacgaggccaagagactgcgcgcgctgcacatgaaggaacacccggattacaagtac
cggccgcgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcggg
ctgctagcggccggcgcgggtggcggcggcgcggccgtggccatgggtgtgggcgtgggc
gtcggggcggcggcggtgggccagcgcttggagagcccaggcggcgcggcgggaggaggc
tacgcgcatgtcaacggctgggctaacggcgcctaccccggctcggtggccgcggcggct
gcggccgcggccatgatgcaggaggcacagctggcctacgggcagcacccaggcgcgggc
ggcgcgcacccgcacgcacacccggcgcacccgcacccgcaccatccgcacgcgcatcct
cacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatctcc
aactctcagggctacatgagcgcgtcgccttcgggctacggcggcatcccttacggcgcc
gcggccgccgccgccgccgctgcgggcggcgcgcaccagaactcggcggtggcggcagcg
gcagccgcggcagccgcgtcgtcgggggccctgggcgccctcggatctctggtcaagtcg
gagccgagcggcagtccgccggccccggctcactcacgggcaccgtgtcccggggacctg
cgcgagatgatcagcatgtacctgcccgccggcgagggtggcgacccggcggcggcagcg
gctgcggcggcccaaagccggctgcactcgctgccacagcactaccagggcgcgggcgcg
ggcgtcaacggcacggtgcccctgacgcacatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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