KEGG   Mus musculus (house mouse): 20671
Entry
20671             CDS       T01002                                 
Symbol
Sox17
Name
(RefSeq) SRY (sex determining region Y)-box 17
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    20671 (Sox17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    20671 (Sox17)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    20671 (Sox17)
SSDB
Motif
Pfam: HMG_box Sox17_18_mid HMG_box_2 HTH_24
Other DBs
NCBI-GeneID: 20671
NCBI-ProteinID: NP_001276393
MGI: 107543
Ensembl: ENSMUSG00000025902
UniProt: Q61473
Structure
Position
1:complement(4561154..4567624)
AA seq 419 aa
MSSPDAGYASDDQSQPRSAQPAVMAGLGPCPWAESLSPLGDVKVKGEVVASSGAPAGTSG
RAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALVEPQAGALGPEGGRVAMDGLG
LPFPEPGYPAGPPLMSPHMGPHYRDCQGLGAPALDGYPLPTPDTSPLDGVEQDPAFFAAP
LPGDCPAAGTYTYAPVSDYAVSVEPPAGPMRVGPDPSGPAMPGILAPPSALHLYYGAMGS
PAASAGRGFHAQPQQPLQPQAPPPPPQQQHPAHGPGQPSPPPEALPCRDGTESNQPTELL
GEVDRTEFEQYLPFVYKPEMGLPYQGHDCGVNLSDSHGAISSVVSDASSAVYYCNYPDI
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgagcagcccggatgcgggatacgccagtgacgaccagagccagccccggagcgcgcag
cccgcggtgatggcagggttgggcccctgtccctgggccgagtccctgagccccctcggg
gatgtaaaggtgaaaggcgaggtggtggcgagtagcggggcgccagccgggacgtcgggc
cgagccaaagcggagtctcgcatccggcggccgatgaacgcctttatggtgtgggccaaa
gacgaacgcaagcggttggcacagcagaacccagatctgcacaacgcagagctaagcaag
atgctaggcaagtcttggaaggcgttgaccttggcagagaagcggcccttcgtggaagag
gccgagcggctgcgcgtgcagcatatgcaggaccaccccaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcgcatgaagcgggtggagggaggcttcctgcacgctctcgtc
gagccccaggccggcgcgcttggtcccgagggcggccgcgtggccatggatggcctgggt
ctgcctttcccggagccgggctatccggccggtcctccgctgatgtctccgcacatgggc
ccccactatcgggactgccagggactgggcgctcccgcgctcgacggctaccctctgccc
actccggacacatccccgctggatggcgtggagcaggacccggctttctttgcagccccg
ctgccaggggactgcccggcggccggcacctacacttacgctccagtctcggactatgca
gtgtccgtagagccgcccgctggccccatgcgagtggggccggacccctcgggccctgcg
atgccggggatcctggcgccccccagcgctctgcacctgtactacggcgcgatgggctcg
cccgccgcaagtgcggggcgcggtttccacgcgcaaccccagcagccgctgcaaccgcag
gcaccgccgccgccaccgcagcagcagcacccagcgcacggccccgggcaaccttcgccc
cctcccgaggctctgccctgccgggatggcacggaatccaaccagcccactgagctccta
ggggaggtggaccgcacggaattcgaacagtatctgccctttgtgtataagcccgagatg
ggtcttccctaccagggacacgactgcggagtgaacctctcagacagccacggagccatt
tcctccgtggtgtccgacgctagctcagcggtctactattgcaactaccccgacatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (30)   
   RefSeq(nuc) (10)   
   GenBank (10)   
   EMBL (10)   
3D Structure (2)   
   PDB (2)   
Protein domain (4)   
   Pfam (4)   
All databases (72)   

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