KEGG   Mus musculus (house mouse): 20677
Entry
20677             CDS       T01002                                 
Symbol
Sox4, Sox-4
Name
(RefSeq) SRY (sex determining region Y)-box 4
  KO
K23581  transcription factor SOX4 (SOX group C)
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    20677 (Sox4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    20677 (Sox4)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    20677 (Sox4)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 20677
NCBI-ProteinID: NP_033264
MGI: 98366
Ensembl: ENSMUSG00000076431
UniProt: Q06831
Structure
Position
13:complement(29132902..29137682)
AA seq 440 aa
MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHM
ADYPDYKYRPRKKVKSGNAGAGSAATAKPGEKGDKVAGSSGHAGSSHAGGGAGGSSKPAP
KKSCGPKVAGSSVGKPHAKLVPAGGSKAAASFSPEQAALLPLGEPTAVYKVRTPSAATPA
ASSSPSSALATPAKHPADKKVKRVYLFGSLGASASPVGGLGASADPSDPLGLYEDGGPGC
SPDGRSLSGRSSAASSPAASRSPADHRGYASLRAASPAPSSAPSHASSSLSSSSSSSSGS
SSSDDEFEDDLLDLNPSSNFESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEV
SEMISGDWLESSISNLVFTY
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggtacaacagaccaacaacgcggagaacactgaggctctgctggccggggagagctcg
gactcgggcgccggcctggagctgggcatcgcgtcctccccgacgcctggctccaccgcg
tcgacgggcggcaaggcggacgaccccagctggtgcaagacgcccagtggccacatcaag
cggcccatgaacgcctttatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctaggcaaacgctggaagctgctc
aaggacagcgacaagattccgttcatccaggaggcggagcggctgcgcctcaagcacatg
gctgactaccctgactacaagtaccggccgcgaaagaaggtgaagtcgggcaacgcgggc
gcgggatcggcggccacagccaagccaggggagaagggcgacaaggtcgcgggcagcagc
ggccacgcgggaagcagccacgcggggggtggcgcgggcggcagctccaagcccgcgccc
aagaagagctgtggccccaaggtggcgggcagctcggtcggcaagccccacgctaagctg
gtcccggcgggcggcagcaaggcggctgcatcgttctctccagagcaagctgccctgctg
cccctgggggagcccacggccgtctacaaggtgcggactcccagtgcggccactccggcc
gcctcctcctcgccgtccagtgcgctggccaccccagccaaacaccctgccgacaagaaa
gtgaagcgcgtctacctgtttggaagcctgggcgcttcggcgtctcccgtcgggggcctg
ggagcgagcgccgaccccagtgatccactggggttgtacgaagatggaggcccgggatgc
tcgcccgatggccggagtctgagcggccgcagcagcgcagcatcatcgccagccgccagc
cgatcgcccgctgaccaccgcggctacgccagcctacgcgcagcctcgcccgccccgtcc
agcgcgccctcgcacgcgtcctcctcgctctcctcgtcctcttcctcctcctcgggctct
tcgtcgtccgacgacgagttcgaagacgacctgctcgacctgaaccccagctcaaacttt
gagagcatgtccctgggcagtttcagctcctcatcggcgctcgatcgggacctggatttt
aacttcgaacccggctcaggctcccacttcgaattcccggactattgcacgcccgaggtg
agcgagatgatctcgggagattggctggagtccagcatctctaacctggtcttcacctac
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (43)   
   RefSeq(nuc) (1)   
   GenBank (21)   
   EMBL (21)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (74)   

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