KEGG   Mus musculus (house mouse): 20678
Entry
20678             CDS       T01002                                 
Symbol
Sox5, A730017D01Rik
Name
(RefSeq) SRY (sex determining region Y)-box 5
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    20678 (Sox5)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    20678 (Sox5)
SSDB
Motif
Pfam: HMG_box HMG_box_2 MPS2
Other DBs
NCBI-GeneID: 20678
NCBI-ProteinID: NP_001230092
MGI: 98367
Ensembl: ENSMUSG00000041540
UniProt: P35710 Q2TBA9 B2KFM4 Q8C4K8
Structure
Position
6:complement(143774151..144728008)
AA seq 679 aa
MLTDPDLPQEFERMSSKRPASPYGETDGEVAMVTSRQKVEEEESERLPAFHLPLHEVDGN
KVMSSLAPYNSSTSPQKAEEGGRQSGESVSSAALGTPERRKGSLADVVDTLKQRKMEELI
KNEPEDTPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQ
LLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQL
PPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGP
LQLQDEVAQPLNLSAKPKTSDGKSPASPTSPHMPALRINSGAGPLKASVPAALASPSARV
STIGYLNDHDAVTKAIQEARQMKEQLRREQQALDGKVAVVNSIGLSNCRTEKEKTTLESL
TQQLAVKQNEEGKFSHGMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFM
VWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYK
YKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPSAIAMA
GMPSPHLPSEHSSVSSSPEPGMPVIQSTYGAKGEEPHIKEEIQAEDINGEIYEEYDEEEE
DPDVDYGSDSENHIAGQAN
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggagacagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaggaggagagtgagaggctcccagcctttcaccttcccttacatgaagtcgatggcaat
aaagttatgtcttcattagctccatacaactcatctacctcacctcagaaggcggaagaa
ggtgggcgacagagtggcgagtccgtgtcgagcgcagccctggggactcccgagcggcgc
aagggcagcttagcggatgtggtggacaccctgaagcagaggaagatggaagagctgatc
aagaatgagccagaagacactcccagtattgaaaagctactctccaaggactggaaagac
aagctcctggcaatgggatcagggaactttggagaaataaaagggactcctgagagcctc
gctgagaaggagcggcagctcatgggtatgatcaatcagctgaccagtctacgggagcaa
ctcctggctgcccacgatgagcagaagaagttggctgcatctcagatagagaaacagcgt
cagcagatggagctggccaagcagcaacaggagcagatcgcgaggcaacagcagcagctt
ctgcagcaacaacacaaaatcaacttgcttcagcaacagatccaggttcaaggtcagctg
ccgccattgatgattcccgtgttccctcctgaccagcggaccctcgcagcagctgcccag
caaggattcctccttcctcctggtttcagctacaaggctgggtgcagtgacccttaccct
gttcagctgatcccaaccactatggcagctgctgctgcagcaacaccaggcttaggccca
ctccagctgcaggatgaagtggcccagccactgaacctatcagctaagcccaagacctct
gatggcaaatcacctgcatcacccacctctcctcacatgccagctctgagaataaacagt
ggggctggccccctcaaagcctctgtcccggcagcattagctagtccttctgcaagagtt
agcacaataggctatttaaatgaccacgatgctgtcaccaaggcaatccaagaagctcgc
cagatgaaagagcaactcaggcgagagcagcaagcgttggacgggaaggtggccgtggtg
aacagcataggtctcagcaactgccggacagaaaaggaaaaaacaacactggagagcctg
actcagcagttggcagttaaacagaatgaagaagggaaatttagccatggaatgatggat
ttcaatatgagtggagattctgacggaagcgctggagtctcagagtcaagaatttacagg
gaatccaggggacgtggtagcaacgagccccacataaagcgtccaatgaatgccttcatg
gtgtgggcgaaagatgaacggaggaaaatccttcaggcctttcccgacatgcacaattcc
aacatcagcaagatactgggatctcgctggaaagctatgaccaacctagagaaacagcca
tactatgaggagcaggcccgcctcagcaaacagcacctggagaagtacccggactacaag
tacaagcctaggccaaagcgcacctgtctggtggacggcaagaaactgcgtatcggggag
tacaaggccatcatgcggaaccggaggcaggaaatgcgacagtacttcaacgttgggcaa
caagcacagatccccatcgcgacggccggagttgtataccccagcgccatcgccatggca
ggaatgccgtcccctcacctgccctccgagcactcgagcgtgtccagcagcccggagccc
gggatgcccgtgatccagagcacttacggcgccaagggagaggagccccacatcaaggaa
gagatccaggctgaggacatcaacggagagatttacgaggagtacgatgaggaggaggag
gacccggatgtggattatgggagtgacagcgaaaaccacattgcgggacaagccaactga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   PRONIT (37)   
Protein sequence (50)   
   UniProt (4)   
   SWISS-PROT (1)   
   RefSeq(pep) (45)   
DNA sequence (79)   
   RefSeq(nuc) (45)   
   GenBank (17)   
   EMBL (17)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (185)   

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