KEGG   Mus musculus (house mouse): 20842
Entry
20842             CDS       T01002                                 
Symbol
Stag1, SA-1, Scc3
Name
(RefSeq) STAG1 cohesin complex component
  KO
K06671  cohesin complex subunit SA-1/2
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    20842 (Stag1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    20842 (Stag1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    20842 (Stag1)
SSDB
Motif
Pfam: STAG SCD RFX5_DNA_bdg Cnd3
Other DBs
NCBI-GeneID: 20842
NCBI-ProteinID: NP_033308
MGI: 1098658
Ensembl: ENSMUSG00000037286
UniProt: Q9D3E6
Position
9:100479762..100840597
AA seq 1258 aa
MITSELPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPPSTNKKPRKSPGEKSRI
EAGIRGAGRGRANGHPQQNGDGDPVTLFEVVKLGKSAMQSVVDDWIELYKQDRDIALLDL
INFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCE
FIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTN
RELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLV
YSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAH
PPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFD
LEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQ
LIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLL
KTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVLRKTVKSFLAVCQQCL
SNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFID
QDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDY
GDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFA
LTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKK
TVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRSKKG
RPPLHRKRVEDESLDNTWLNRTDTMIQTPGPLPTPQLTSTVLRENSRPMGEQIQEPESEH
GSEPDFLHNPQMQISWLGQPKLEDLNRKDRTGMNYMKVRAGVRHAVRGLMEEDAEPIFED
VMMSSRSQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgattacttcagagttaccagtgttacaggattcaactaatgaaactactgcccactct
gatgctggcagcgaacttgaagaaacagaggtcaaaggaaaaagaaaaaggggtcgtcct
ggccggcctccatcaacaaataagaaacctcgaaaatctccaggagaaaagagcagaatt
gaagctggaattcgaggagcaggtcgtggaagagccaatgggcacccccaacagaacggc
gacggggatcctgtcaccttatttgaggtggtgaagctggggaagagtgcaatgcagtcc
gtggtggatgactggattgaattatataaacaagacagggacatcgcacttctggattta
atcaacttttttatccagtgttcaggatgtcgaggtacggtcagaatagagatgtttcga
aatatgcagaacgcagaaataatcagaaaaatgactgaagaatttgatgaggacagtggt
gactacccccttacaatgcctggtcctcagtggaaaaaatttcgttccaatttttgtgaa
tttattggagtcctgattcgacagtgtcaatatagcataatttatgatgaatatatgatg
gacaccgtaatttcccttttgactggtttgtcagactcccaagtcagagcttttaggcat
acaagtacccttgctgcaatgaagctgatgactgctctggtgaatgttgctttaaacctc
agtattcatcaagataatacacagaggcaatatgaagctgagagaaataaaatgattggg
aagagagccaatgaaagactggagttactacttcagaaacgtaaagagctacaagaaaat
caagatgaaattgaaaatatgatgaactctatctttaagggtatatttgttcatcgatac
cgtgatgcaattgctgaaattcgagccatctgtattgaagaaattggagtgtggatgaaa
atgtatagcgatgccttcctaaatgacagttacttgaaatatgtaggatggactcttcac
gataggcaaggggaagtcagactgaagtgtttgaaagctctacaaagcctgtataccaat
agagaattattccccaaattggagctatttacaaatcgattcaaggatcgcattgtatca
atgactcttgacaaagaatatgatgttgctgtggaagcaatccgattggttactctgatc
cttcatggcagtgaagaagctctttccaacgaagactgtgaaaatgtttaccatttggtg
tattcagcacatcgccctgttgctgtggcagctggagagttcctacacaaaaagctgttc
agcagacatgacccacaagcagaggaagcgttagcgaagaggagaggaaggaacagtcca
aacgggaacctcattaggatgcttgttcttttctttctggaaagtgagttacatgaacat
gcagcctacttggtggacagcttgtgggagagctctcaagaactgttgaaagactgggaa
tgtatgacagagttactattagaagaacctgttcaaggagaagaagcaatgtctgaccgt
caagagagtgctcttatagagctaatggtctgtacaattcgtcaggcagctgaggcacat
cctccagtgggaaggggtactggcaagagagtgctaacagccaaagaaaggaaaactcaa
attgatgataggaacaaattaactgaacattttatcattacacttcctatgttactatca
aagtattctgcagatgctgagaaggtagcaaacttgctgcaaattccacagtattttgat
ctagaaatctacagcacaggtcggatggaaaagcacctggatgctttattaaaacaaatt
aagtttgttgtagagaaacatgtagaatcagatgtcctagaagcctgcagtaaaacctac
agcattttatgcagtgaagagtataccattcagaatcgagttgatattgctcggagccaa
ctgattgatgaatttgtagatcgattcaatcattctgtagaagacctgttgcaagagggt
gaagaagctgacgatgatgatatctacaatgttctttccaccttaaagcgtttaacttct
tttcacaatgctcatgatctcactaaatgggatctatttggtaattgctacagactattg
aagactggaattgaacatggagctatgccagaacagatagtcgtacaagcactgcagtgt
tcccattactcaattctgtggcagttggtgaaaattactgacggatctccttccaaagag
gatttgttggtattgaggaaaacagtgaagtcttttctggctgtttgccaacagtgccta
tctaatgttaatactccagttaaggaacaggctttcatgctgctctgtgatcttttaatg
atttttagccaccaattaatgacaggtggcagagagggccttcagcctttggtgtttaat
ccagatactggactccagtctgaactcctcagttttgtgatggatcatgttttcattgac
caagatgaggaaaaccaaagcatggagggtgatgaggaagatgaagctaataaaattgaa
gccttacataaaaggaggaacctgcttgctgccttcagcaaacttatcatttatgatatt
gttgacatgcacgcagctgcagacatctttaaacactacatgaagtattacaatgactat
ggtgatattattaaggaaacactgagtaagaccaggcagattgataaaattcagtgtgct
aagactctcattctcagtctgcaacagttgtttaatgaacttgttcaagaacaaggtcct
aatctggataggacatctgcccacgtcagtgggattaaagaactggcacgtcgttttgcc
cttacatttggattggaccagatcaagacccgagaagctgttgccacacttcacaaggat
ggaatagagtttgcctttaaataccagaatcagaaaggacaagaatacccaccccctaat
ctggcttttctagaagtactaagtgaattttcttctaaactccttcgacaggacaagaaa
actgttcattcgtatcttgaaaaattcctcaccgagcagatgatggaaaggagggaggat
gtgtggcttccactcatctcgtatagaaactcattagtcactggaggtgaagatgacagg
atgtctgtgaacagtggaagtagcagcagtaaaacgtcctcagtaaggagtaagaaagga
agacccccactgcacagaaaacgagtagaagatgaaagtctggataacacatggctaaat
aggactgacacgatgattcagactcctggacccttgccaaccccacagctcacctccacg
gtacttagagaaaacagccgtcccatgggagagcagattcaggaacctgagtctgagcat
ggctctgaaccagactttttacataatccccagatgcagatctcttggttaggccagccg
aagttagaagacttgaatcggaaggacagaacagggatgaactacatgaaagtaagagct
ggagtccggcacgccgttcggggtctaatggaggaagatgctgagcccatctttgaagat
gtgatgatgtcatcacggagccagttagaagacatgaatgaagaatttgaagacaccatg
gttattgatttgcccccatcaagaaatcgccgagagagagctgagctaaggccagacttc
tttgactctgcagctatcatagaagatgattcaggatttggaatgcctatgttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (7)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (41)   
   RefSeq(nuc) (11)   
   GenBank (15)   
   EMBL (15)   
Protein domain (4)   
   Pfam (4)   
All databases (86)   

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