KEGG   Mus musculus (house mouse): 208727
Entry
208727            CDS       T01002                                 
Symbol
Hdac4, 4932408F19Rik, HD4
Name
(RefSeq) histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04371  Apelin signaling pathway
mmu04613  Neutrophil extracellular trap formation
mmu05034  Alcoholism
mmu05203  Viral carcinogenesis
mmu05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    208727 (Hdac4)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    208727 (Hdac4)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    208727 (Hdac4)
   05203 Viral carcinogenesis
    208727 (Hdac4)
  09165 Substance dependence
   05034 Alcoholism
    208727 (Hdac4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    208727 (Hdac4)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     208727 (Hdac4)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     208727 (Hdac4)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 208727
NCBI-ProteinID: NP_997108
MGI: 3036234
Ensembl: ENSMUSG00000026313
UniProt: Q6NZM9
Position
1:complement(91856501..92123424)
AA seq 1076 aa
MSSQSHPDGLSGRDQPVELLNPARVNHMPSTVDVATALPLQVAPTAVPMDLRLDHQFSLP
LEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAM
KHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLN
KKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFPL
RKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVATALKKRPLDVTDSACSSAPGSGPS
SPNSSSGNVSTENGIAPTVPSAPAETSLAHRLVTREGSVAPLPLYTSPSLPNITLGLPAT
GPAAGAAGQQDAERLALPALQQRILFPGTHLTPYLSTSPLERDGAAAHNPLLQHMVLLEQ
PPTQTPLVTGLGALPLHSQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQHLVI
QQQHQQFLEKHKQQFQQQQLHLSKIISKPSEPPRQPESHPEETEEELREHQALLDEPYLD
RLPGQKEPSLAGVQVKQEPIESEEEEAEATRETEPGQRPATEQELLFRQQALLLEQQRIH
QLRNYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTLML
KHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLY
GTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATG
ELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQ
QAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYL
AAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRL
VLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSMEKVMDIHSKYW
RCLQRLSSTVGHSLIEAQKCEKEEAETVTAMASLSVGVKPAEKRSEEEPMEEEPPL
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgagctcccaaagccatccagatggactttctggccgagaccagcctgtggagctgctg
aatcctgcccgtgtgaaccacatgcccagcacggtggacgtggctacagcgctgcctctg
caagtggcccctacagcagtacccatggacctgcgcttggaccaccagttctcactgccc
ttggaacctgcattgcgggagcagcaactgcagcaggaactcctagcactgaaacagaag
cagcagatccagcggcagatactcattgcagagttccagcgtcaacatgagcagttgtcc
cgacagcatgaggcacagttgcatgaacatatcaagcagcagcaggagatgctggccatg
aagcaccagcaggagctgctggagcaccagcggaaactggagcggcaccggcaagagcag
gagctggagaagcagcaccgtgagcagaagctgcagcagctcaagaacaaggagaagggc
aaagagagtgctgtggcgagcacagaggtgaagatgaagctgcaggagtttgttctcaac
aagaagaaggctctagcccaccggaacctgaaccactgcatttccagcgatccccgctac
tggtatgggaagacacagcacagctcccttgaccagagctctccaccccagagtggggtg
tcagcctcctacaaccaccccgtcttgggaatgtacgacgccaaagatgacttccctctt
aggaaaacagcttctgaacctaacctgaaattacgctcaaggcttaagcagaaagtagct
gagagacggagcagccccctgttgcgcaggaaagatggccctgtggccactgctctaaaa
aagcgacccctggatgttacagactccgcatgcagcagcgcccctggctccggtcccagc
tctccaaatagcagctctggcaacgtcagcactgagaatggcatcgcacccactgtgccc
agcgctccagctgagacgagcttggcacacagacttgtgactcgagaaggctcagtcgcc
ccacttcctctctacacgtcaccatccttacccaacatcaccttgggacttcctgccact
ggccctgccgctggtgcggcaggtcagcaggatgctgagaggcttgctctcccagctctc
cagcagcggatcttgttccctgggacccacctcaccccgtacctgagcacctcgcccctg
gagagggacggtgcagcagctcacaaccccctcctgcagcacatggtcctgctggagcag
ccacccacccagacaccccttgtcacaggcctgggggcgctgcccctccactcacagtcc
ctggttggtgcggacagggtgtccccatccattcacaagctgcggcagcaccgccctctg
gggcgcacgcagtcagcacccctgccgcagaacgcacaggccctgcagcacctggtgatc
cagcagcagcaccagcagttcctggagaagcacaagcaacagttccagcagcagcagctg
cacctcagcaagataatctccaaacctagtgagccacctcggcagcctgagagccaccca
gaggagacagaggaggagctccgtgagcaccaggccttgctggatgagccctacctagat
cggctacctgggcagaaggagccctccctggctggtgtgcaggtgaagcaggagcccatt
gagagtgaggaggaagaagcggaggccactcgagagacagagcccggccagcgcccagcc
actgagcaggagctgctcttcagacagcaagccctcctactggagcagcagaggatccac
cagttaagaaactaccaggcatctatggaggctgctggcatccctgtgtcatttggcagc
cacagacctctgtctcgggcacagtcctccccagcatctgccaccttccccatgtcagtc
caggagccccccaccaagccaaggttcaccacaggtcttgtgtatgacacactgatgttg
aagcatcagtgcacctgtgggaacaccaacagccacccggagcatgctgggaggatccag
agcatctggtcccgcctgcaggagactggactccgtggcaagtgtgagtgcatccgtgga
cgcaaggccacattggaggagctgcagacagtgcactcggaggcccacacactcctctac
ggcacaaatcctctcaacagacagaaactggacagctcgctgacctcagtgttcgtcagg
cttccttgtggtggtgttggggtggatagcgacaccatatggaatgaggtgcactcgtct
ggggcagcccgcctggctgtaggctgtgtagtggagctggtcttcaaggtggccacggga
gagctaaagaatggctttgctgtggttcgtcccccaggacaccatgccgaggagagcaca
cccatgggtttctgctactttaactccgtggcagttgcagccaaacttctccagcagagg
ctgaatgtgagcaagatcctcattgtagactgggatgtacatcatgggaatgggacccag
caggccttctacaatgaccccaatgttctctacatgtccctgcaccgctatgacgatggg
aacttcttcccaggaagtggagcaccagatgaggtgggcacagggccaggcgtgggtttc
aatgtcaacatggctttcacgggtggcctcgaaccccccatgggagacgctgagtacttg
gcagccttcagaacggtggttatgcctatcgcaaatgagtttgccccagatgtggtactg
gtgtcatcgggcttcgatgctgtggagggccaccccacacctcttggagggtacaatctc
tctgccaaatgttttgggtacttgacaaaacagctgatgggcttagctggtggccggctt
gtgctggcccttgagggaggccatgacctgacagccatctgtgatgcttctgaagcctgc
gtgtctgctctgctgggaaacgagcttgagcctctgccagaaaaggttctacatcagaga
cccaatgccaatgctgtccactccatggagaaagtgatggacatccacagcaagtactgg
cgctgcctgcagcgtctgtcctccacggtggggcactctctgattgaggcgcaaaagtgt
gagaaggaagaagctgagacagtcaccgccatggcctcgctgtctgtaggcgtcaaacct
gctgagaagagatctgaggaggagcccatggaggaggaaccaccactgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (27)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (25)   
DNA sequence (47)   
   RefSeq(nuc) (25)   
   GenBank (11)   
   EMBL (11)   
Protein domain (2)   
   Pfam (2)   
All databases (106)   

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