KEGG   Mus musculus (house mouse): 20922
Entry
20922             CDS       T01002                                 
Symbol
Supt4a, Supt4h, Supt4h1, Supt4h1a
Name
(RefSeq) SPT4A, DSIF elongation factor subunit
  KO
K15171  transcription elongation factor SPT4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    20922 (Supt4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    20922 (Supt4a)
   03019 Messenger RNA biogenesis [BR:mmu03019]
    20922 (Supt4a)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     20922 (Supt4a)
  RNA polymerase I system
     20922 (Supt4a)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     20922 (Supt4a)
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 20922
NCBI-ProteinID: NP_033322
MGI: 107416
Ensembl: ENSMUSG00000020485
UniProt: P63271
Position
11:87628377..87634449
AA seq 117 aa
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI
IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
NT seq 354 nt   +upstreamnt  +downstreamnt
atggccctggagacggtaccaaaggacctgcggcatctgcgggcttgtttgctgtgctcg
ttagtcaagactatagaccagttcgaatatgatgggtgtgacaattgcgatgcataccta
caaatgaagggcaacagagagatggtttatgactgcaccagctcttcatttgatggaatc
attgcgatgatgagtccagaggacagctgggtctccaagtggcagcgagtcagtaacttt
aagccaggtgtatatgctgtgtccgtcactggtcgcctgccccaaggaatcgtgcgggag
ctgaaaagtcgaggagtggcctacaaatccagagacacagcaataaagacctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (30)   
   RefSeq(nuc) (2)   
   GenBank (14)   
   EMBL (14)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

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