KEGG   Mus musculus (house mouse): 20926
Entry
20926             CDS       T01002                                 
Symbol
Supt6, 5131400N11Rik, SPT6, Supt6h, mKIAA0162
Name
(RefSeq) SPT6, histone chaperone and transcription elongation factor
  KO
K11292  transcription elongation factor SPT6
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    20926 (Supt6)
   03036 Chromosome and associated proteins [BR:mmu03036]
    20926 (Supt6)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     20926 (Supt6)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     20926 (Supt6)
SSDB
Motif
Pfam: SH2_2 YqgF HHH_7 HTH_44 SPT6_acidic Spt6_S1 HHH_3 S1 Tex_N HHH_9 Tex_YqgF SH2
Other DBs
NCBI-GeneID: 20926
NCBI-ProteinID: NP_033323
MGI: 107726
Ensembl: ENSMUSG00000002052
UniProt: Q62383 Q3TY72 Q3UWU8
Position
11:complement(78097575..78136798)
AA seq 1726 aa
MSDFVESEAEESEEEYNHEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDERGNLKDFIND
DDDEEEGEEDEGSDSGDSEDDVGHKKRKRPSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDDEDDEEEYGKEEHEKEAIAGEIFQDEEGEEGQEAVEAPMAPPDEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDY
EYEDDETEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKAAEDDELEEEADWIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
VNKKPHVVTIAGENRDAQMLTEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSAGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSNRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSTQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq 5181 nt   +upstreamnt  +downstreamnt
atgtctgattttgtggaaagtgaggccgaagagtcagaagaagaatacaatcatgaaggc
gaggtggtacctagagtcaccaagaagtttgtggaagaggaggatgatgatgaggaggag
gaagaggagaatctagatgatcaagatgagcgaggcaacctcaaagactttatcaatgac
gatgatgatgaagaagaaggggaggaggatgagggcagcgactctggggactcagaagac
gatgttggccacaagaagagaaaacgcccatcttttgatgaccgcctggaagatgatgat
tttgacctcattgaggagaatttgggtgttaaagtcaaacgaggacaaaaataccgacgt
gtcaaaaaaatgtctgatgatgatgaagatgatgaagaggaatatggcaaagaggaacac
gagaaggaggccattgcaggggaaatcttccaagatgaagaaggggaagaaggccaggag
gctgtagaggcccccatggcccctcctgacgaggaggaggaagatgatgaggagtcagac
attgacgatttcattgtggatgatgatggacagcctctgaaaaaacccaaatggcgaaaa
aagctccctggatatacagatgcagccctgcaggaagcccaggagatcttcggtgtggac
tttgactatgatgaatttgagaaatacaatgaatacgatgaagaactggaagaagactat
gagtacgaggatgatgagactgaaggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagtcgcaggagcatctttgagatgtacgagcctagtgagctggagagcagc
cacctcacagaccaggacaatgaaatccgagccactgacttgcctgagaggttccagctc
cgctccatcccagtcaaggcagctgaggatgatgagctagaagaggaagctgactggatc
tatagaaatgccttcgcaacaccgaccatctccctccaggacagctgtgattacctagac
cgtgggcagccaactagtagcttcagtcgtaaagggcccagcacagttcagaagatcaaa
gaggccctgggcttcatgcggaatcagcattttgaggtgcctttcattgccttctaccga
aaggagtatgtggaacctgagctgcacatcaatgacctgtggagggtgtggcagtgggat
gagaagtggactcagctgagaatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttatcagtatgagcaaatctctgctgaccctgacaaacctcttgctgacggcatc
cgggctctagatactactgacatggagaggctcaaagatgttcagtcaatggatgaactg
aaagacgtctacaaccatttcttactttactacgggcgtgacatccccaagatgcagaat
gctgccaaggctagccggaagaagctgaaacgcataaaggaggatggcgatgaagaaggt
gaaggtgaggaggctgaagatgaggaacagaggggaccagagctcaagcaagcctcccgc
cgagacatgtataccatctgccagagtgccgggctagatggcctggccaaaaagtttggc
ctcacacctgagcagtttggggagaacctccgtgacagctaccagcgccacgagacagag
cagttccctgcagagcctttggagctggccaaagattacgtgtgcagccagttccctaca
ccagaagctgtgcttgaaggtgcccgatacatggttgcactacagattgccagggagccc
cttgtcagacaggtgctgagacaaacctttcaggagagagccaagctaaacataacccca
accaagaaaggtagaaaggatgtggatgaggcccactacgcttactcttttaagtactta
aagaacaagcctgttaaagagctgagagacgaccagttcctcaagataggcctggctgag
gatgaagggctgctcaccattgacatcagcatagatatgaagggagtggaagggtatggt
aatgaccagacatattttgaggagatcaagcagttttactaccgggatgagttcagccac
caagtacaggaatggaaccggcagcgcactatggccattgagcgagctctgcagcagttc
ctctacgtgcaaatggccaaagaacttaagaacaagctgctagctgaggccagggagagt
gttgtgaaggcctgtagccgaaagctctacaactggttgagagtggcaccctaccgtcca
gatcagcaggtagaggaggacgacgactttatggatgagaaccaggggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgtgccctagtcaat
ggtgaaggagaagtgactgatttcctccgcctgccccattttaccaagcggcgaactgca
tggagagaagaggagcgggaaaagaaggctcaagatattgaaaccctaaagaagtttctt
gtgaataagaagcctcatgtggtcactatcgcaggagagaacagggatgcccagatgctg
actgaggatgtgaagcggatagtgcatgagctggaccaaggccaacagctgtcttctatt
ggggtggagctggttgacaatgagctggccattctgtacatgaacagcaagaaatcagag
gcagagttccgggattatccaccagttttgagacaagctgtctctctagcccggcgtatc
caagaccctctgatagaatttgcccaggtgtgcagctcagatgaagacatcctgtgtctc
aagtttcatcccttgcaggagcatgttgtgaaagaggagctgcttaacgccttgtactgt
gaattcatcaaccgggtcaatgaggtcggggtggatgtcaaccgtgccattgcccatcct
tacagccaggccttgatccagtatgtctgtggcctgggaccccgaaaagggacccacctg
ctgaagattttgaaacagaacaacactcgactcgagagccggactcagctggtcaccatg
tgtcatatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacactgct
tctctgggggacagcactgactcatacattgaagttcttgatggctctcgagtccaccct
gaaacgtacgagtgggccaggaagatggcagtggatgccttagaatacgatgagtctgca
gaagatgccaatcctgctggagcccttgaggaaatcttggaaaacccagagcggctgaag
gatttagatcttgatgcctttgcagaagaactagagagacagggctatggtgacaagcac
atcacactgtatgacatccgagcagagctcagttgtaggtataaggacctccggacagcc
taccgctctcctaacacagaggagatcttcaatatgttaaccaaagagacgccagagacc
ttctacattggaaagcttatcatctgcaatgttaccggcattgctcacaggcgcccacag
ggtgagagctatgaccaggccatccgaaatgatgagacagggctgtggcagtgccccttc
tgtcaacaagacaacttccctgagctaagcgaggtctggaaccattttgacagtggatca
tgccctggtcaggccattggtgtgaaaacacggctagacaatggcgtcaccggcttcatc
cctaccaaattcctcagtgacaaggtggtgaagaggccagaggagcgagtgaaggtgggg
atgactgttcactgccggatcatgaagatcgatattgaaaagttcagtgcagacctgacc
tgccggacctcagacctcatggacaggaacaatgagtggaaactgcccaaggacacctac
tatgactttgatgcggaagctgcagaccacaagcaggaagaggatatgaaacgaaagcag
cagcggaccacatacatcaagcgagtgattgcacacccgtccttccataacataaatttc
aagcaagcagaaaagatgatggagaccatggaccaaggggatgttatcattcggcccagc
agtaaaggtgaaaaccatctgacggtgacctggaaagtcagtgctggcatctaccagcac
gtggacgtgcgggaagagggcaaggagaacgccttcagcctgggagccactctttggatc
aacagtgaggaatttgaagacttggatgagattgttgcccgctatgtccagcccatggct
tcctttgctcgagaccttctgaaccacaaatattaccaggactgtagtggtggggaccga
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttac
ttcatctgtgcctgcaaggagctgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactcctgaaggattccggtaccggggccagatt
ttcccaactgtgaatggactcttcaggtggtttaaggatcactatcaggatcctgtacca
ggcatcactcccagtagcagtaacagaacacggacccctgcttctatcaatgctacccca
gccaacatcaatcttgcagatctcacacgggctgtgaatgccttgcctcagaacatgact
tcacagatgttcagtgccattgctgctgtgacaggccaggggcagaaccccaatgctacc
ccagcccagtgggcatccagccagtatggctacggtggcagcggaggaggcagcagcgcc
taccatgtgttcccaacaccagcccagcagccagtggccacaccactaatgaccccaagc
tactcctatactaccccgagccagcccattaccaccccacaataccaccagctccaggcc
agcaccaccccacagtctacacaggcccagccccagccttcctccagctcccgacaacgg
caacagcagccaaagtccaacagccatgcagctatcgactggggcaagatggccgagcag
tggctacaggaaaaggaggcagaacgacggaaacagaaacagcggctgaccccacgaccc
tctcccagccccatgatcgagagcacccccatgtccattgctggcgatgcgaccccactc
ctggacgagatggatcggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (6)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (25)   
   RefSeq(nuc) (3)   
   GenBank (11)   
   EMBL (11)   
Protein domain (12)   
   Pfam (12)   
All databases (80)   

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